Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq64 116 6e-21
seq61 116 6e-21
seq23 86.0 9e-12
>seq64
Length=816055
Score = 116 bits (128), Expect = 6e-21
Identities = 108/137 (79%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| ||||| | |||||||| ||||| || ||||| || || || ||||||
Sbjct 728724 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 728665
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| ||||||| || || | ||| || || || || |||||||||||||| || |||||
Sbjct 728664 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 728605
Query 146171 ATTCCTTCTTTATCTTG 146187
||||||||||| |||||
Sbjct 728604 ATTCCTTCTTTGTCTTG 728588
>seq61
Length=567400
Score = 116 bits (128), Expect = 6e-21
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| | ||||| || || ||||| ||||| || || ||||| ||
Sbjct 445379 CCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGAC 445438
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||| | || |||| || || ||||||||||| | ||||||||| || |||||
Sbjct 445439 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445498
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|||||||| |||||||| ||| || ||| ||||||
Sbjct 445499 ATTCCTTCCTTATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACC 445558
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280
|||| ||||| ||||| || || || || |||| ||| || ||||||||
Sbjct 445559 TCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTTT 445608
Score = 113 bits (124), Expect = 7e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| ||||| || |||||||| | ||||||||| || || || ||||| ||
Sbjct 444467 CCACCTCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGAC 444526
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||| | || |||| || || ||||||||||| | ||||||||| || || ||
Sbjct 444527 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGG 444586
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 444587 ATTCCTTCCTTATCCTG 444603
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| | ||| || |||| || || || || || ||| || || || ||||| ||
Sbjct 445151 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGA-ATGTTGTAATCGGA 445209
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
|||||||| | || |||| || || ||||||||||| | ||||||||| || |||||
Sbjct 445210 CAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGG 445269
Query 146170 AATTCCTTCTTTATCTTG 146187
|||||||| ||||||||
Sbjct 445270 GATTCCTTCCTTATCTTG 445287
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| | |||| || || ||||| ||||| || || ||||| ||
Sbjct 444923 CCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGAC 444982
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||||| || || | ||| || ||||| ||||||||||| || ||||| || ||
Sbjct 444983 AGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGG 445042
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || |||||||| ||
Sbjct 445043 ATACCCTCTTTATCCTG 445059
>seq23
Length=343512
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| ||||| | |||| || ||||| || || || || || || || |||
Sbjct 313250 CCACCTCTCAGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 313191
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||||| || || | || || ||||| ||||||| ||||||||| || || ||
Sbjct 313190 AGAGTTCTGCCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGG 313131
Query 146171 ATTCCTTCTTTATCTTG 146187
||||| || || || ||
Sbjct 313130 ATTCCCTCCTTGTCCTG 313114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743525786590720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |