Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq65 116 8e-21
seq52 114 3e-20
>seq65
Length=94251
Score = 116 bits (128), Expect = 8e-21
Identities = 824/1304 (63%), Gaps = 45/1304 (3%)
Strand=Plus/Plus
Query 248827 TTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAA 248886
|||| ||||| ||||||||| || |||||| | || |||||||| || ||| ||
Sbjct 83463 TTTGGCTTCAAGACGCTGGAGCGGTCATATCTCTTGAAGATTGATGGAAAAGTCGCCGAG 83522
Query 248887 CGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGC 248946
|| ||||||||| | ||||| ||||| | || || || |||||||| |||
Sbjct 83523 AGACCCCAGCACATGGTCATGCGTGTGGCCATTGGTATCCATGGCGATGACATTCCCAGC 83582
Query 248947 GTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTC 249006
|| |||||||||||| | ||| || | | || || || | || || ||
Sbjct 83583 GTCATCGAGACGTACAACCTGATGTCGCAAAAATTCTTCACCCACGCGTCGCCAACTCTG 83642
Query 249007 TTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTT-CTTGCCATGCAAG 249064
|| || |||||||| | ||| | ||| || || || |||||| |||||||| | |
Sbjct 83643 TTTAATGCCGGTACTCCTCATC-CGCAGATGTCTTCCTG-TTTCTTGGTTGCCATGAAGG 83700
Query 249065 ACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAAT 249121
||||||| |||||||||| |||||||| || | |||| || ||| || ||
Sbjct 83701 ACGACTCCATCGACGGCATCTATGACACCCTCA---AGACCTGTGCTCTGATCTCCAAGG 83757
Query 249122 TCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAG 249181
|| || || || ||||| | | |||||| || | | || || |||||| |
Sbjct 83758 CTGCTGGAGGCATTGGTCTGCACATTCACAACATTAGATCCACCGGGTCTTACATCGCTG 83817
Query 249182 GTACAAATGG--GGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGC 249239
| || || || ||| | || ||| | || | | || || | ||||||
Sbjct 83818 GAACCAACGGCACGTC--CAACGGCATCATTCCAATGGTGAGAGTGTTCAACAACACCGC 83875
Query 249240 CAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGT 249296
||| | | || |||||| || | || || |||| || |||| | ||
Sbjct 83876 CAGATACGTCGACCAGGGAGGCAACAAGCGGCCTGGCGCGTTTGCTCTGTACGTTGAGCC 83935
Query 249297 GTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCAT 249356
|||||| | ||||| || || || | ||| | |||||| | || || ||| ||
Sbjct 83936 ATGGCACTCGGATATTTTTGACTTTATCGACATCCGGAAGAACCATGGTAAGGAGGAGAT 83995
Query 249357 GAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAA 249416
||||| | ||||| ||| | |||||| | | ||| |||||||| | ||| |
Sbjct 83996 CAGAGCCAGAGACCTGTTCCCTGCGCTGTGGATTCCAGACCTGTTCATGGAGAGAGTCGA 84055
Query 249417 GGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTACA 249476
| ||| || |||||||| | || || ||||| || || | || ||| | |
Sbjct 84056 GCAGAACGCTGAGTGGACGCTGTTCTCGCCTTCCGAGGCTCCAGGGCTTTCCGACGTGTA 84115
Query 249477 CGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATCCAACGGCATCG---GCAAGAC 249533
||||| ||| ||| | | ||| | | ||||||| | ||| | || ||||
Sbjct 84116 CGGCGACGAGTTCAAGGAGCTCTACACCAGATACGAAAAGGAAGGCCGTGGACGCCAGAC 84175
Query 249534 AATCAAGGCTCGGACCCT-TTTTGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGC 249592
||||||| | || || | | || | ||||| |||||| || ||||| ||
Sbjct 84176 GGTCAAGGCACAGAAGCTGTGGTACG-CCATTTTGGAGGCCCAGACGGAAACAGGCACGC 84234
Query 249593 CGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACC 249651
| | | || ||| ||| ||||| |||||| |||||| ||||| | | ||||||| |
Sbjct 84235 CAT-TCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAGAACCTTGGTATC 84293
Query 249652 ATCCGCTCGTCAAATCTCTG-TGCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGC 249710
||| ||||| ||| | || ||| || | | | ||||| || |||||| | ||
Sbjct 84294 ATCAAGTCGTCTAATTTGTGCTGC-GAAATTGTCGAGTACTCATCTCCAGAGGAGGTGGC 84352
Query 249711 CGTCTGCAACCTGGCAAGCATCAATCTCGTGAGGC-ACG-TGAGGGCG--GACAGGAC-- 249764
||| || || |||| ||| || || | || |||| || |||| ||
Sbjct 84353 CGTGTGTAATTTGGCGTCGATCGCCCT-TCCAGCCTTCGTTGAGTCCGACGACAATACCA 84411
Query 249765 ----GTTCGACTTCGAGCGTCTTCACCGGACGGCGAAACAGGCGATCAAAAACCTCAACA 249820
|| | ||||||| || |||| || | || | | || ||||||||||
Sbjct 84412 GCTGGTACAACTTCGAAAAGCTGCACCAGATCACCAAGGTTGTCACTAAGAACCTCAACA 84471
Query 249821 AGGTGATTGATGTCAATTTTTACCCCCTT---GAGGAATGCAGGTTGTCCAACATGAAGC 249877
|| | || || || | ||| || || |||| | || |||||||||
Sbjct 84472 AGATCATCGACAGAAACTATTATCCTGTTCCAGAGGCA---AGAACATCCAACATGCGCA 84528
Query 249878 ACCGTCCATGTGGGCTGGGCGTTCAGGCACTGCACGACGTCTACATGGTGATGGGATTCC 249937
|| | || || |||| || |||| ||| |||||| | |||| | || || | |
Sbjct 84529 ACAGGCCGATTGCCGTGGGTGTCCAGGGCCTGGCCGACGTGTTCATGCAGCTGAGACTGC 84588
Query 249938 CCTTCGAGTCAGAGGAGG-CAGCGACGCTAAATAAACAGATTTTCGAGACCATCTATCAC 249996
| || || ||| |||| ||| || ||| || | |||||||||||||||||||| |||
Sbjct 84589 CTTTTGACTCACCAGAGGCCAGAGA-GCTGAACATCCAGATTTTCGAGACCATCTACCAC 84647
Query 249997 GGGAGCGTCGAGGCGTCCATCGAAAGGGCCAAGATCGACGGACCATACGAGAGTTTTCAG 250056
||| | ||||| || ||| |||| | || || |||||||| ||| ||
Sbjct 84648 GGGGCTTTGGAGGCCTCTGCCGAGCTGGCCGTTAGGGATGGCAAATACGAGACCTTTGAG 84707
Query 250057 GGGTCGCCCGCGTCGTTCGGGAAGCTTCAGTTTGATCTTTGGGG 250100
|| ||||| |||||| || | | ||||| || ||||||||
Sbjct 84708 GGATCGCCGGCGTCGCAGGGTATTTTGCAGTTCGACCTTTGGGG 84751
>seq52
Length=883241
Score = 114 bits (126), Expect = 3e-20
Identities = 241/356 (68%), Gaps = 4/356 (1%)
Strand=Plus/Plus
Query 248808 AGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAAT 248867
||| |||||| |||| | ||| ||||| ||| |||| | ||| ||| | || |||||
Sbjct 649572 AGACTTGGAGATGGATTACCTTGGTTTCAGAACAATGGAAAGATCATATTTGCTAAAAAT 649631
Query 248868 TGATGGCAAGATCGTGGAACGAAT--TCAGCACATGTTGATGCGAGTGGCTGTCGGGATT 248925
||||| |||| | || | || | |||| | |||| ||| ||||||| | |||||
Sbjct 649632 GGATGG-AAGACCTTGCGA-GACTCCTCAGTATTTGTTTATGAGAGTGGCCATTGGGATA 649689
Query 248926 CACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATG 248985
||||| | | | ||||| |||| ||||| || |||| ||| ||| | |
Sbjct 649690 CACAAAGGTAATATAGACCGCGTTCTCGAAACATACAGACTTATGTCCGAAAAATACTTC 649749
Query 248986 ACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGC 249045
| ||||| | || ||||| |||||||||||||||| | | | | ||| ||
Sbjct 649750 ATCCATGCTTCGCCTACGCTGTTCAACGCCGGTACCGAAACGCCTAATTTATCCTCCTGT 649809
Query 249046 TTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG 249105
||||||||||| ||| | | |||||| | | ||||||| ||| || | || |
Sbjct 649810 TTTCTTCTTGCAATGGATGGGGACTCTATAAATGGCATTTTCAGAACGATTCACAAGTCC 649869
Query 249106 GCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGC 249161
|| |||||||||| || |||||||| || | ||| || |||||||||||
Sbjct 649870 GCCCTGATTTCTAAAGCGGCTGGCGGAATTGGCATACACGTTTCAAACATCCGAGC 649925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073765491996288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |