Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq61 118 8e-22
>seq61
Length=567400
Score = 118 bits (130), Expect = 8e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
||||| | |||| ||||| || ||||| || ||||||||||| |||| || ||| ||
Sbjct 444476 AGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTA 444535
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| ||||| | || || || ||| | || |||||||| || || ||| | ||||||
Sbjct 444536 CCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCC 444595
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
||||| ||||| |||||| | | | ||||||| || ||| |||| ||||
Sbjct 444596 TTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTG 444655
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | || || ||||| ||||| || |||||||||||
Sbjct 444656 ATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 444693
Score = 113 bits (124), Expect = 3e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| || || ||||||||||| ||||||| | ||| ||| ||||| | ||| || ||
Sbjct 444725 GTCGACTCCTTTTGAATGTTATAGTCGGATAACGTTCTACCGTCTTCGAGTTGCTTACCA 444784
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
|| | ||||||||||| || || ||| | ||||||||||| ||||| ||||
Sbjct 444785 GCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATCTTGAATTTTGGACTTG 444844
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | | | ||||||| || ||| |||| ||||||| | || |||||||| |||
Sbjct 444845 ACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTT 444904
Query 18309 TTTACAAAAATTTGCAT 18325
|| || |||||||||||
Sbjct 444905 TTAACGAAAATTTGCAT 444921
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || || || |||||||||||||| |||| || ||| ||| |||||
Sbjct 445169 ACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCT 445228
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| || || || ||| | || |||||||| || || || | ||||||||||| |
Sbjct 445229 AGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGA 445288
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|||| |||||| | | | ||||||| || ||| |||| ||||||| | ||
Sbjct 445289 ATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTT 445348
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||| ||||| || |||||||||||
Sbjct 445349 CCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
Score = 95.1 bits (104), Expect = 9e-15
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| || |||| ||| | || || ||||| ||||||||||| |||| || ||| |||
Sbjct 445390 TCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACC 445449
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
||||| | || || || ||| | || |||||||| || || || | ||||||||
Sbjct 445450 GTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTT 445509
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
||| ||| | ||||| | | | ||||||| | || || | |||||
Sbjct 445510 ATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGAT 445569
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331
||||||||||||| || || || ||||| |||||||||||
Sbjct 445570 AGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTTTTAA 445611
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| || |||| ||| | || || ||||| ||||||||||| || | || ||| | |
Sbjct 444934 TCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCC 444993
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
||||| | ||| || || || | || | ||| |||||||| || | || || ||
Sbjct 444994 GTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCTTT 445053
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
||| ||||| || || | | | ||||||| || ||| |||| ||||||
Sbjct 445054 ATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGAT 445113
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| | || |||||||| ||||| || |||||||||||
Sbjct 445114 GGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343694865170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |