Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq57 84.2 4e-11 >seq57 Length=170889 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 || |||||| | || || || ||||| ||||||||| | || ||||| || ||||||| Sbjct 158703 GAAGGAGATCTCGGTCCAGTTTACGGCTTCCAATGGAGACACTTTGGGGCAGAATATGTC 158762 Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512 | | | || || || || || ||| ||||| ||||||| || | | || Sbjct 158763 GACGCCGATACAGACTACACAGGCAAAGGTTACGATCAGCTGGCCAAAATCATTGATACT 158822 Query 35513 CTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTT 35572 ||||| || || | |||||||| || ||| ||| |||||||||||| || | | Sbjct 158823 TTGAGAACCAACCCCTACGATAGAAGAATTATTTTGAGCGCATGGAATCCTCCGGCTTTC 158882 Query 35573 CACCTTATGGCTCTTCCTCCATGCCA-CATGACTGCTCAATTTTATGT 35619 | ||||||||||| |||||||| | ||| ||| |||||||| Sbjct 158883 AAGGACATGGCTCTTCCACCATGCCATGTTTTCTG-TCAGTTTTATGT 158929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583163183030