Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq65 217 2e-51
seq45 201 1e-46
seq52 95.1 2e-14
>seq65
Length=94251
Score = 217 bits (240), Expect = 2e-51
Identities = 604/917 (66%), Gaps = 16/917 (2%)
Strand=Plus/Minus
Query 63242 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63301
|| || |||||| ||| | || |||| | ||| || || || |||||||| || ||
Sbjct 84077 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 84018
Query 63302 TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63361
|| || ||||| | ||| ||||| || || ||||| | |||| ||
Sbjct 84017 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 83958
Query 63362 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63421
| | |||||| || ||||| || || | ||| | || | | |||||||| |||||
Sbjct 83957 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 83898
Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481
|||||||| || | |||||| |||||||| || | ||||||| ||||||||| || ||
Sbjct 83897 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 83838
Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541
||| || | || ||||| || | ||| || || ||| | ||| || |||
Sbjct 83837 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 83778
Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601
||||| || || || || || ||||| | || || || | |||||||||||
Sbjct 83777 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 83718
Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGT 63661
||| || ||| || || ||||| || | |||||| |||||| || || |||
Sbjct 83717 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 83658
Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721
||| || |||||||| | || || || ||||| || || |||||| || | || ||
Sbjct 83657 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 83598
Query 63722 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 63778
||||||||| || |||| | | | ||| | ||| || || | || ||||||||
Sbjct 83597 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 83541
Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838
| ||||||||| ||||| || | | ||| | || ||||| | || || ||
Sbjct 83540 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 83481
Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898
|| || || || |||||||||||||| |||||||||| ||||| | || | || ||
Sbjct 83480 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 83421
Query 63899 GAGCTTATCCTTATATTTGTTAACTATATCCATGGTA--ATACTT--GAAATAATCGGAG 63954
|||| || | | | || |||| |||| | | | || || || || |
Sbjct 83420 CAGCTCGTCGGCGTGCTCCTGGAC--AATCC--GGTACGTTTCGTCCGAGATCATTGGCG 83365
Query 63955 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 64014
|| | || ||||| || || || | ||||| | | | | || | || | |||
Sbjct 83364 AAGGCTTGCCATTCTTGGGGTTGATATAGTGGTACAGCTGGTCAACGACCTGGGAAAACT 83305
Query 64015 GtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAAT 64074
| || | |||| |||||| || || || ||||||||||||||||| || |||| || |
Sbjct 83304 GCTTGGTGGTTTGCTTGTGCAGGTTGGAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGT 83245
Query 64075 CCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACC 64133
| ||||| || || || || || || | |||||||| || | |||| || |
Sbjct 83244 CGGGATGGATCGTGGT-CATGTAAGCGGCGGTCTCGGCTGCAAGGTTATCCAGCTCGATG 83186
Query 64134 GTTGTTACTCCATTATA 64150
|| || || |||| |||
Sbjct 83185 GTGGTGACGCCATGATA 83169
>seq45
Length=88998
Score = 201 bits (222), Expect = 1e-46
Identities = 411/600 (69%), Gaps = 18/600 (3%)
Strand=Plus/Plus
Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637
|| ||| || || ||| ||||||||||||||||| | || || ||||| || || ||
Sbjct 65116 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 65175
Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697
|| || ||||| || || | ||| || ||||| || || || || || || || || ||
Sbjct 65176 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 65235
Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT-----G 33752
||| || || || || |||||||| |||| |||||||| || ||| || ||| |
Sbjct 65236 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 65293
Query 33753 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811
|| | ||||| || || ||||| |||||||||| || | ||| || || || || ||
Sbjct 65294 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 65352
Query 33812 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33871
||| || || || | | ||| ||| || || || || || ||||||| |||
Sbjct 65353 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 65412
Query 33872 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33931
||| ||||||| || ||||| || || ||||| || ||||||||||| | |||||
Sbjct 65413 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 65472
Query 33932 GGTAATCTGCACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCATCA 33989
| || ||||| || | | | || ||||| | || || || || || || || ||
Sbjct 65473 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 65530
Query 33990 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 34046
|| ||||| || ||||| || | ||| ||| | |||| || ||| |||
Sbjct 65531 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 65589
Query 34047 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 34105
|| ||||| || | | || || || | ||| | ||| || | ||||| || || ||
Sbjct 65590 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 65649
Query 34106 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165
||||||||| || ||||| | ||| || || || || | ||| ||||| | ||||| ||
Sbjct 65650 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 65709
>seq52
Length=883241
Score = 95.1 bits (104), Expect = 2e-14
Identities = 378/581 (65%), Gaps = 22/581 (4%)
Strand=Plus/Minus
Query 62942 TGCAACAGATGCCAGATTACACACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 62998
||| | ||| | ||||| || || ||| ||||||||| || | ||||| | ||
Sbjct 650505 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 650449
Query 62999 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63058
||| || ||||| ||||||| || || |||||||| || ||| |||||| ||
Sbjct 650448 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 650389
Query 63059 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63118
|| || || || || || | ||| || || || ||||| ||||||| ||| |||||
Sbjct 650388 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 650329
Query 63119 TTTCCAGACGACTCGAGCCTTT-ATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAG 63177
| ||| | | || | |||| | | || | || | | || | ||| ||
Sbjct 650328 ATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGT 650270
Query 63178 TATACAATCGTT-CGAACTCGTCTCCCCAAACATTGTCC---AATCTAGGACATTCATCC 63233
| || || | | | || || ||||| || |||| | || |||| ||| ||||
Sbjct 650269 TGTA-AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATCC 650214
Query 63234 --GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63291
||| | | | |||||||| || | || ||| | |||||| | ||| || |
Sbjct 650213 TCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTA 650156
Query 63292 TCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTTA 63350
|||||||||| ||||| |||||| | | | ||| || ||||| || || | | |
Sbjct 650155 TCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCA 650096
Query 63351 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63410
|| || |||||| | | | || | ||||||||| || || || ||| | | | ||
Sbjct 650095 AG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCT 650037
Query 63411 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63470
|| | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | |||
Sbjct 650036 GGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATA 649977
Query 63471 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63511
|| | || ||||| ||| ||||||| || || || || ||
Sbjct 649976 GGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTA 649936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817080400480
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