Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq65 217 2e-51 seq45 201 1e-46 seq52 95.1 2e-14 >seq65 Length=94251 Score = 217 bits (240), Expect = 2e-51 Identities = 604/917 (66%), Gaps = 16/917 (2%) Strand=Plus/Minus Query 63242 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63301 || || |||||| ||| | || |||| | ||| || || || |||||||| || || Sbjct 84077 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 84018 Query 63302 TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63361 || || ||||| | ||| ||||| || || ||||| | |||| || Sbjct 84017 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 83958 Query 63362 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63421 | | |||||| || ||||| || || | ||| | || | | |||||||| ||||| Sbjct 83957 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 83898 Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481 |||||||| || | |||||| |||||||| || | ||||||| ||||||||| || || Sbjct 83897 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 83838 Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541 ||| || | || ||||| || | ||| || || ||| | ||| || ||| Sbjct 83837 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 83778 Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601 ||||| || || || || || ||||| | || || || | ||||||||||| Sbjct 83777 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 83718 Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGT 63661 ||| || ||| || || ||||| || | |||||| |||||| || || ||| Sbjct 83717 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 83658 Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721 ||| || |||||||| | || || || ||||| || || |||||| || | || || Sbjct 83657 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 83598 Query 63722 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 63778 ||||||||| || |||| | | | ||| | ||| || || | || |||||||| Sbjct 83597 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 83541 Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838 | ||||||||| ||||| || | | ||| | || ||||| | || || || Sbjct 83540 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 83481 Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898 || || || || |||||||||||||| |||||||||| ||||| | || | || || Sbjct 83480 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 83421 Query 63899 GAGCTTATCCTTATATTTGTTAACTATATCCATGGTA--ATACTT--GAAATAATCGGAG 63954 |||| || | | | || |||| |||| | | | || || || || | Sbjct 83420 CAGCTCGTCGGCGTGCTCCTGGAC--AATCC--GGTACGTTTCGTCCGAGATCATTGGCG 83365 Query 63955 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 64014 || | || ||||| || || || | ||||| | | | | || | || | ||| Sbjct 83364 AAGGCTTGCCATTCTTGGGGTTGATATAGTGGTACAGCTGGTCAACGACCTGGGAAAACT 83305 Query 64015 GtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAAT 64074 | || | |||| |||||| || || || ||||||||||||||||| || |||| || | Sbjct 83304 GCTTGGTGGTTTGCTTGTGCAGGTTGGAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGT 83245 Query 64075 CCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACC 64133 | ||||| || || || || || || | |||||||| || | |||| || | Sbjct 83244 CGGGATGGATCGTGGT-CATGTAAGCGGCGGTCTCGGCTGCAAGGTTATCCAGCTCGATG 83186 Query 64134 GTTGTTACTCCATTATA 64150 || || || |||| ||| Sbjct 83185 GTGGTGACGCCATGATA 83169 >seq45 Length=88998 Score = 201 bits (222), Expect = 1e-46 Identities = 411/600 (69%), Gaps = 18/600 (3%) Strand=Plus/Plus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 || ||| || || ||| ||||||||||||||||| | || || ||||| || || || Sbjct 65116 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 65175 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 || || ||||| || || | ||| || ||||| || || || || || || || || || Sbjct 65176 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 65235 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT-----G 33752 ||| || || || || |||||||| |||| |||||||| || ||| || ||| | Sbjct 65236 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 65293 Query 33753 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811 || | ||||| || || ||||| |||||||||| || | ||| || || || || || Sbjct 65294 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 65352 Query 33812 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33871 ||| || || || | | ||| ||| || || || || || ||||||| ||| Sbjct 65353 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 65412 Query 33872 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33931 ||| ||||||| || ||||| || || ||||| || ||||||||||| | ||||| Sbjct 65413 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 65472 Query 33932 GGTAATCTGCACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCATCA 33989 | || ||||| || | | | || ||||| | || || || || || || || || Sbjct 65473 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 65530 Query 33990 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 34046 || ||||| || ||||| || | ||| ||| | |||| || ||| ||| Sbjct 65531 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 65589 Query 34047 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 34105 || ||||| || | | || || || | ||| | ||| || | ||||| || || || Sbjct 65590 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 65649 Query 34106 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 ||||||||| || ||||| | ||| || || || || | ||| ||||| | ||||| || Sbjct 65650 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 65709 >seq52 Length=883241 Score = 95.1 bits (104), Expect = 2e-14 Identities = 378/581 (65%), Gaps = 22/581 (4%) Strand=Plus/Minus Query 62942 TGCAACAGATGCCAGATTACACACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 62998 ||| | ||| | ||||| || || ||| ||||||||| || | ||||| | || Sbjct 650505 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 650449 Query 62999 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63058 ||| || ||||| ||||||| || || |||||||| || ||| |||||| || Sbjct 650448 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 650389 Query 63059 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63118 || || || || || || | ||| || || || ||||| ||||||| ||| ||||| Sbjct 650388 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 650329 Query 63119 TTTCCAGACGACTCGAGCCTTT-ATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAG 63177 | ||| | | || | |||| | | || | || | | || | ||| || Sbjct 650328 ATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGT 650270 Query 63178 TATACAATCGTT-CGAACTCGTCTCCCCAAACATTGTCC---AATCTAGGACATTCATCC 63233 | || || | | | || || ||||| || |||| | || |||| ||| |||| Sbjct 650269 TGTA-AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATCC 650214 Query 63234 --GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63291 ||| | | | |||||||| || | || ||| | |||||| | ||| || | Sbjct 650213 TCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTA 650156 Query 63292 TCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTTA 63350 |||||||||| ||||| |||||| | | | ||| || ||||| || || | | | Sbjct 650155 TCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCA 650096 Query 63351 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63410 || || |||||| | | | || | ||||||||| || || || ||| | | | || Sbjct 650095 AG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCT 650037 Query 63411 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63470 || | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | ||| Sbjct 650036 GGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATA 649977 Query 63471 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63511 || | || ||||| ||| ||||||| || || || || || Sbjct 649976 GGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTA 649936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817080400480