Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq65 192 8e-44 seq45 192 8e-44 seq52 107 3e-18 >seq65 Length=94251 Score = 192 bits (212), Expect = 8e-44 Identities = 442/663 (67%), Gaps = 6/663 (1%) Strand=Plus/Minus Query 66035 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 66094 || || |||||| ||| | || |||| | ||| || || || |||||||| || || Sbjct 84077 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 84018 Query 66095 TATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154 || | ||||||| ||| ||||| || || ||||| | |||| || Sbjct 84017 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 83958 Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214 | | |||||| | ||||| || || | ||| | || | | |||||||| ||||| Sbjct 83957 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 83898 Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 |||||||| || | |||||| |||||||| || | ||||||| ||||||||| || || Sbjct 83897 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 83838 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 ||||| || || ||||| || | ||| || || | | | ||| || ||| Sbjct 83837 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 83778 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 ||||| || || || || || ||||| | || || || | || |||||||| Sbjct 83777 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 83718 Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454 ||| || || || ||| ||||| || | |||||| |||||| || || || Sbjct 83717 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 83658 Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514 ||| || |||||||| | || || || ||||| || || |||||| || | || || Sbjct 83657 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 83598 Query 66515 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 66571 ||||||||| || |||| | | | ||| | ||| || || | || |||||||| Sbjct 83597 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 83541 Query 66572 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 66631 | ||||||||| ||||| || ||| || | || ||||| | || || || Sbjct 83540 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 83481 Query 66632 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691 || || || || |||||||||||||| |||||||||| ||||| | || | ||||| Sbjct 83480 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 83421 Query 66692 GAG 66694 || Sbjct 83420 CAG 83418 >seq45 Length=88998 Score = 192 bits (212), Expect = 8e-44 Identities = 414/609 (68%), Gaps = 14/609 (2%) Strand=Plus/Plus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 || ||| || || ||| || |||||||||||||| | || || ||||| || || || Sbjct 65116 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 65175 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 || || ||||| || || | ||| || ||||| || || || ||||| || ||||| || Sbjct 65176 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 65235 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACT-GTC 36330 |||||| || || || || ||||| |||| |||||||| || | ||| || ||| Sbjct 65236 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTC 65295 Query 36331 ATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389 | ||||| || || ||||| |||||||||| || | ||| || || ||||| || | Sbjct 65296 GTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGG 65354 Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 | || || || | | ||| ||| || || || || || || |||| ||| | Sbjct 65355 CGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGT 65414 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 || ||||||| || ||||| || || || || || ||||||||||| | ||||| | Sbjct 65415 ACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAG 65474 Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCACT 36567 || || || || | | | || ||||| | || || || || || || ||||| Sbjct 65475 GAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGA 65532 Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTAGT---T 36623 || ||||| || ||||| || | ||| ||| | ||||| | || | ||| | Sbjct 65533 AGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGT-TGAGTCTGT 65591 Query 36624 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 36683 | ||||| || | | || || || | ||| | ||| || | ||||| || || |||| Sbjct 65592 TGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCT 65651 Query 36684 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT 36743 ||||||| || ||||| | ||| || || || || | || || || | ||||| || Sbjct 65652 CTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCTTC 65711 Query 36744 TTTGATTTT 36752 ||| ||||| Sbjct 65712 TTTTATTTT 65720 >seq52 Length=883241 Score = 107 bits (118), Expect = 3e-18 Identities = 600/934 (64%), Gaps = 40/934 (4%) Strand=Plus/Minus Query 65735 TGCAACAGATGCCAGATTACAAACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 65791 ||| | ||| | ||||| || || ||| ||||||||| || | ||||| | || Sbjct 650505 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 650449 Query 65792 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 65851 ||| || ||||| |||||||||| || |||||||| || ||| |||||| || Sbjct 650448 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 650389 Query 65852 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 65911 || || || || || || | ||| || || || ||||| ||||||| ||| ||||| Sbjct 650388 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 650329 Query 65912 TTTCCAGACGACTCGAGCCTTT-ATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAG 65968 | ||| | | || | |||| | | || | || | || | ||| || | Sbjct 650328 ATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGT 650270 Query 65969 TGTATACAATCGTT-CGAACTCGTCTCCCCAAACATTGTCC---AATCCAGGACATTCAT 66024 |||| || | | | || || ||||| || |||| | ||||||| ||| || Sbjct 650269 TGTA---AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGAT 650216 Query 66025 CC--GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGG 66082 || ||| | | | |||||||| || | || ||| | |||||| | ||| || Sbjct 650215 CCTCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGG 650158 Query 66083 AATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTT 66141 ||||||||||| |||||||||||| | | | ||| || ||||| || || | | Sbjct 650157 TATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCT 650098 Query 66142 TAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTC 66201 ||| || |||||| | | | || ||||||||| || || || ||| | | | | Sbjct 650097 CAAG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGC 650039 Query 66202 CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 66261 | || | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | || Sbjct 650038 CTGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCA 649979 Query 66262 TTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAA 66321 | || | || || |||||||||||||| || || || || || || || || | Sbjct 649978 TAGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGA 649919 Query 66322 TATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 66381 | || || || || ||||| || ||| |||||| || | ||| | | | | | Sbjct 649918 TGTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGA 649860 Query 66382 A-CGTATCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGTAGAAAACAG--CTA 66437 | ||| | ||||| | |||| || |||| ||| ||| ||||||||| | Sbjct 649859 ATCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGA 649801 Query 66438 GACATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 66496 | ||| || || | || || || || || | ||||| ||||| || | || | Sbjct 649800 TAAATTAGG---CGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTA 649744 Query 66497 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 66556 |||||| || | || |||| || || | | | |||||||| | || || || || Sbjct 649743 TTTTTCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCC 649684 Query 66557 TACTGCGACACGCATTAACATGTGCTGAG--GTCTTTCAACGATCTTGTTGTTTATTTTC 66614 | || || | ||| |||| | ||||| |||| ||| | |||| | ||||| Sbjct 649683 AATGGCCACTCTCATAAACAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTT 649626 Query 66615 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 66648 | ||| || ||| |||||| ||| | ||||||| Sbjct 649625 AGCAAATATGATCTTTCCATTGTTCTGAAACCAA 649592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172257007440