Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq65 206 4e-48 seq45 205 1e-47 seq52 105 1e-17 >seq65 Length=94251 Score = 206 bits (228), Expect = 4e-48 Identities = 632/967 (65%), Gaps = 14/967 (1%) Strand=Plus/Minus Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922 ||||||||| || | || ||| | || ||| ||| ||| | | || || ||| Sbjct 84128 GAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCA 84069 Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982 ||| | | | || |||| | ||| || || || |||||||| || || || || Sbjct 84068 CTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAG 84009 Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042 ||||||| ||| |||||| || || ||||| | |||| || | | ||| Sbjct 84008 GTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAAT 83949 Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102 ||| || ||||| || || | ||| | || | | || || || ||||| |||||||| Sbjct 83948 ATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTG 83889 Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162 || | |||||| |||||||| || | ||||||| ||||||||| || || ||||| || Sbjct 83888 GTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGT 83829 Query 80163 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 80222 || ||||| || | ||| || || ||| | ||| || ||| ||||| || Sbjct 83828 GCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGACCAAT 83769 Query 80223 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 80282 || || || || ||||| | || || || | || ||||||||||| || || Sbjct 83768 GCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGAT 83709 Query 80283 GCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGC 80342 | || || ||||| || | |||||| |||||| || || || ||| || || Sbjct 83708 GGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACCGGC 83649 Query 80343 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTC 80402 |||||| | || || || ||||| || || |||||| |||| || ||||||||||| Sbjct 83648 ATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGTCTC 83589 Query 80403 AATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAACATGTGC 80460 || | | | | || ||| | ||| || || | || |||||||| | ||||||| Sbjct 83588 GAT-GACGCTGGGA-ATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTGC 83531 Query 80461 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520 || ||||| || ||| || || || ||||| | || || |||| || || Sbjct 83530 TGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTCCAGCGTCTTG 83471 Query 80521 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 80580 || |||||||||||||| |||||||||| ||||| | || | ||||| || | || Sbjct 83470 AAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTTCAGCTCGTCG 83411 Query 80581 TTATATTTGTTAACTACATCCATGGT--GATACTT--GAAATAATCGGAGAATGTTTCCC 80636 | | | || |||| ||| | | | | || || || || ||| | || || Sbjct 83410 GCGTGCTCCTGGAC--AATCC--GGTACGTTTCGTCCGAGATCATTGGCGAAGGCTTGCC 83355 Query 80637 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 80696 ||| || || || | ||||| | | | | || | || | ||| | || | || Sbjct 83354 ATTCTTGGGGTTGATATAGTGGTACAGCTGGTCAACGACCTGGGAAAACTGCTTGGTGGT 83295 Query 80697 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTG 80756 || |||||| || || || | ||||||||||||||| | |||| || || ||||| Sbjct 83294 TTGCTTGTGCAGGTTGGAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGTCGGGATGGAT 83235 Query 80757 TGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTC 80815 || || || || || || | |||||||| || | |||| || | || || || | Sbjct 83234 CGTGGT-CATGTAAGCGGCGGTCTCGGCTGCAAGGTTATCCAGCTCGATGGTGGTGACGC 83176 Query 80816 CATTATA 80822 ||| ||| Sbjct 83175 CATGATA 83169 >seq45 Length=88998 Score = 205 bits (226), Expect = 1e-47 Identities = 407/597 (68%), Gaps = 12/597 (2%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 || ||| || || ||| ||||||||||||||||| | || | ||||| || || || Sbjct 65116 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 65175 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 || || ||||| || || | ||| || ||||| || || || ||||| || ||||| || Sbjct 65176 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 65235 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT-----G 50130 ||| || || || || || ||||| ||||| |||||||| || ||| || ||| | Sbjct 65236 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 65293 Query 50131 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189 || | ||||| || || ||||| |||||||||| || | ||| || || || || || Sbjct 65294 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 65352 Query 50190 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 50249 ||| || || || | | ||| ||| || || || || || ||||||| ||| Sbjct 65353 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 65412 Query 50250 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 50309 ||| ||||||| || ||||| || || ||||| || ||||||||||| | ||||| Sbjct 65413 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 65472 Query 50310 GGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACT 50369 | || ||||| || | | | || || | || || || || || || ||||| Sbjct 65473 AGGAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGA 65532 Query 50370 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TT 50426 || ||||| || ||||| || | ||| | | | |||||| | ||| || Sbjct 65533 AGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTT 65592 Query 50427 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTC 50486 ||||| || | | || || || | ||| | ||| || | ||||| || || ||||| Sbjct 65593 GTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTC 65652 Query 50487 TGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 |||||| || ||||| | ||| || || || || | ||| ||||| | ||||| || Sbjct 65653 TGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 65709 >seq52 Length=883241 Score = 105 bits (116), Expect = 1e-17 Identities = 587/916 (64%), Gaps = 30/916 (3%) Strand=Plus/Minus Query 79627 AGATTACAAACGGCTA---CCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGG 79683 ||||| || || ||| ||||||||| || | ||||| | |||||| ||||| Sbjct 650492 AGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGATTTCACAACAGAGA 650436 Query 79684 TTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 79743 || |||| ||||| || |||||||| || ||| |||||| || || || || || Sbjct 650435 TTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGCGTCTTTG 650376 Query 79744 TAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 79803 || || | ||| || || || ||||| ||||||| ||| ||||| | ||| | | | Sbjct 650375 TAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGCATGCCACA-GTTT 650317 Query 79804 CGAGCCTTT-ATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTT- 79861 | | |||| | | || | || | || | ||| || ||| | ||| || Sbjct 650316 CTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACC-TGT-TGTAAAGCTTG 650259 Query 79862 -CGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCA--GGACACATCAACG 79918 | || || ||||| || || | ||||||| ||| || ||| | | | Sbjct 650258 ACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCCTCGGAAAAA--AGGC 650201 Query 79919 ACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 79978 |||||||| ||| | || ||| | |||||| | ||| || ||||||||||| || Sbjct 650200 ACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAA 650141 Query 79979 ATAGATCTCTGGTTCTATGCTCCTCGTTTCC-TGTATTCTTTTTAAGATCGAGGAACGCC 80037 ||| |||||| | | | || || ||||| || || | | ||| || |||||| | Sbjct 650140 ATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAG-TCCAGGAACTCA 650082 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 | | || | ||||||||| || || || ||| | | | || |||| ||| ||||| Sbjct 650081 AACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTTCCA 650022 Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157 || ||||| | ||| | |||||| | ||| | ||| | ||| || | || || ||| Sbjct 650021 CCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCCGTTG 649962 Query 80158 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 80217 ||||||||||| || || || || || || || || || || || || Sbjct 649961 GATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGATGTTTGAAACGTGTATG 649902 Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCC 80276 || ||||| || ||| |||||| || | ||| | | | | || ||| | ||||| Sbjct 649901 CCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGAATCGTTCTGAAAATGCC 649843 Query 80277 CTCTATGCTATCATCAATCATGTTAAGTAGAAAACAG--CTAGACATTTGGTGACGACT- 80333 | ||| || || ||| ||| ||||||||| | | ||| || || | Sbjct 649842 ATTTATAGAGTCCCCATCCATTGCAAGAAGAAAACAGGAGGATAAATTAGG---CGTTTC 649786 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 || || || || || | ||||| ||||| || | || ||||||| |||| || | Sbjct 649785 GGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTATTTTTCGGACATAAGTCT 649726 Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453 ||| || || | | | ||||||| | || || || || | || || | ||| || Sbjct 649725 GTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCAATGGCCACTCTCATAAA 649666 Query 80454 CATGTGCTGAG--GTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511 || | ||||| |||| ||| | |||| || ||||| | ||| || ||| ||||| Sbjct 649665 CAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTTAGCAAATATGATCTTTCC 649608 Query 80512 AAAGTTTTAAAACCAA 80527 | ||| | ||||||| Sbjct 649607 ATTGTTCTGAAACCAA 649592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268207428240