Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq45 122 8e-23 >seq45 Length=88998 Score = 122 bits (134), Expect = 8e-23 Identities = 349/529 (66%), Gaps = 11/529 (2%) Strand=Plus/Plus Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| ||||| || ||| || ||||| ||||| | || | ||||| || || || | Sbjct 65119 ACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAG 65178 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAA 13990 || ||||||| ||||| || || | ||| || || | ||||| || || || ||||| Sbjct 65179 ACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAA 65238 Query 13991 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14050 || ||||| || ||||||||||| | | || || ||||| |||| | | ||| Sbjct 65239 AATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCG-TCGT 65297 Query 14051 T-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109 | |||||| | | |||||||| | || | || ||| | || || ||||| || | Sbjct 65298 TGATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGT 65357 Query 14110 TAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA-T 14166 | || | | || |||| | || |||| | ||| || || || || |||| | | Sbjct 65358 TGAAAAGGAACTCAGCTTCCTTAGGGTCCTTG--ACGTAGGTGTCGATCAG-AAGCGAGT 65414 Query 14167 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226 || |||| ||||| ||||| ||||| ||||| || || || || || | || || | Sbjct 65415 ACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAG 65474 Query 14227 ACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14286 ||| || || | | || | ||| |||| || || || || || || || || Sbjct 65475 GAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAG 65534 Query 14287 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTT 14343 | ||||| || ||||| | | || ||||||| ||| | | ||||||| || | Sbjct 65535 CAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTGT 65594 Query 14344 TCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 |||| ||| | ||||| || ||||| | ||| || | ||||| || Sbjct 65595 TCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAA 65643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727604224400