Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq45 125 7e-24
>seq45
Length=88998
Score = 125 bits (138), Expect = 7e-24
Identities = 350/530 (66%), Gaps = 13/530 (2%)
Strand=Plus/Plus
Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718
||| ||||| || ||| || ||||| ||||| | || | ||||| || || || |
Sbjct 65119 ACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAG 65178
Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 13778
|| ||||||| ||||| || || | ||| || || | || || || || || |||||
Sbjct 65179 ACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAA 65238
Query 13779 TATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TT 13836
|| ||||| || ||||||||||| | |||| || ||||| |||| | || ||
Sbjct 65239 AATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTCGTT 65298
Query 13837 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCA 13896
| |||||| | | |||||||| | || | || ||| | || || || || ||
Sbjct 65299 G--ATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCG 65356
Query 13897 TTGAATA--AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA- 13953
||||| | || |||| | || |||| | ||| || || || || |||| |
Sbjct 65357 TTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTG--ACGTAGGTGTCGATCAG-AAGCGAG 65413
Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013
||| |||| ||||| ||||| || || ||||| || || || ||||| | || ||
Sbjct 65414 TACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCA 65473
Query 14014 GACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTA 14073
| ||| ||||| | | || | || ||||||| || || ||||| || || |
Sbjct 65474 GGAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAA 65533
Query 14074 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTT 14130
|| ||||| || ||||| | | || ||||||| ||| | | ||||||| ||
Sbjct 65534 GCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTG 65593
Query 14131 TTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180
||||| ||| | ||||| || ||||| | ||| || | ||||| ||
Sbjct 65594 TTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAA 65643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588405164240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |