Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq45 125 7e-24 >seq45 Length=88998 Score = 125 bits (138), Expect = 7e-24 Identities = 350/530 (66%), Gaps = 13/530 (2%) Strand=Plus/Plus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| ||||| || ||| || ||||| ||||| | || | ||||| || || || | Sbjct 65119 ACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAG 65178 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 13778 || ||||||| ||||| || || | ||| || || | || || || || || ||||| Sbjct 65179 ACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAA 65238 Query 13779 TATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TT 13836 || ||||| || ||||||||||| | |||| || ||||| |||| | || || Sbjct 65239 AATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTCGTT 65298 Query 13837 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCA 13896 | |||||| | | |||||||| | || | || ||| | || || || || || Sbjct 65299 G--ATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCG 65356 Query 13897 TTGAATA--AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA- 13953 ||||| | || |||| | || |||| | ||| || || || || |||| | Sbjct 65357 TTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTG--ACGTAGGTGTCGATCAG-AAGCGAG 65413 Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 ||| |||| ||||| ||||| || || ||||| || || || ||||| | || || Sbjct 65414 TACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCA 65473 Query 14014 GACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTA 14073 | ||| ||||| | | || | || ||||||| || || ||||| || || | Sbjct 65474 GGAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAA 65533 Query 14074 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTT 14130 || ||||| || ||||| | | || ||||||| ||| | | ||||||| || Sbjct 65534 GCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTG 65593 Query 14131 TTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 ||||| ||| | ||||| || ||||| | ||| || | ||||| || Sbjct 65594 TTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAA 65643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588405164240