Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq61 116 4e-21
>seq61
Length=567400
Score = 116 bits (128), Expect = 4e-21
Identities = 154/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031
|||||| ||||||| |||||||| || || |||||||||||| || || || |||
Sbjct 444481 CAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTC 444540
Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
||| || || ||||||||| | || || | |||||| || || || || ||||| || ||
Sbjct 444541 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATC 444600
Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151
|||||| || | | || | ||||| | || || || |||| || | ||
Sbjct 444601 CTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 444660
Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||| || ||||| ||||| ||||| |||||||||
Sbjct 444661 CTTTCCAGTCAAGGTTTTAACGAAAATTTGCATA 444694
Score = 109 bits (120), Expect = 6e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | |||||| | || | || || || ||||| |||||||||||| |
Sbjct 445151 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445210
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || |||||| || || ||||||||| | || || | |||||| || |||||
Sbjct 445211 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445270
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| || || |||||| || | | || | ||||| | || || ||
Sbjct 445271 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 445330
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|||| || | ||||| |||||||| ||||| ||||| |||||||||
Sbjct 445331 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 445378
Score = 105 bits (116), Expect = 7e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
||||| ||||| || ||||||||||| || || || |||||||||||| ||||||
Sbjct 444953 GTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCCGTCTTCGAGTTGCTTACCA 445012
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| | |||| | || ||||| || || || || ||||| || |||||| |||
Sbjct 445013 GCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCTTTATCCTGAATTTTAGATTTC 445072
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | || || || |||| || | ||||| |||||||| |||
Sbjct 445073 ACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTT 445132
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| |||||||||
Sbjct 445133 TTAACGAAAATTTGCATA 445150
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
||||| ||||| || |||||||||||| || || || |||||| || || ||||||
Sbjct 445409 GTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCA 445468
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| | || || | |||||| || ||||| || ||||| || || ||| || |||
Sbjct 445469 GCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATCTTCGATTTG 445528
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | |||||| || | ||| | || ||||||||||| ||
Sbjct 445529 ACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTGCCGGTCAAAGTC 445588
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| || |||||
Sbjct 445589 TTAACGAAAATCTGCAT 445605
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | |||||| | ||| | || || || ||||| ||||| || |||
Sbjct 444695 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 444754
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || |||||||||||| |||||||| | || || | |||||| || || ||
Sbjct 444755 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 444814
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| || || |||||| || | | || | ||||| | || || ||
Sbjct 444815 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 444874
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|||| || | ||||| |||||||| ||||| ||||| |||||||||
Sbjct 444875 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 444922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507013981713120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |