Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq64 120 2e-22
seq61 118 8e-22
>seq64
Length=816055
Score = 120 bits (132), Expect = 2e-22
Identities = 167/233 (72%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| ||| | ||| ||||| | ||||| |||||||| |||||||| ||
Sbjct 728724 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 728665
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| |||| || | ||| || || ||| | ||||| | ||| ||||| ||
Sbjct 728664 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 728605
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|||||||||||||| || ||| ||| || | || ||||| ||| | || ||
Sbjct 728604 ATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACC 728545
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369
|| ||||| ||||| || || |||| || || || ||||| ||||| |||||
Sbjct 728544 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT-TTTGA 728493
>seq61
Length=567400
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| ||| ||||| |||||||| || || || || || ||||||||||||
Sbjct 444467 CCACCTCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGAC 444526
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| |||| ||||||||| || || ||||| | || | | ||| ||||| ||
Sbjct 444527 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGG 444586
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|||||||| || || ||||||| ||| || | || || || || || ||
Sbjct 444587 ATTCCTTCCTTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACC 444646
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | ||| ||||| || || |||| ||||| || ||||||||||||
Sbjct 444647 TCAAGGGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCATA 444694
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| ||||| | || | ||| || || ||||| ||||||||||||
Sbjct 445151 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445210
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| |||| ||||||||| || || ||||| | || | | ||| ||||| ||
Sbjct 445211 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445270
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|||||||| || || ||||||| ||| ||| | || || || || || ||
Sbjct 445271 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 445330
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | ||| ||||| || || |||| ||||| || ||||||||||||
Sbjct 445331 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 445378
Score = 114 bits (126), Expect = 9e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| ||||| | ||| | ||| || || ||||| ||||| || ||| |
Sbjct 444695 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 444754
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| ||||||| | ||| || |||||| | || | | ||| ||||| ||
Sbjct 444755 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 444814
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|||||||| || || ||||||| ||| ||| | || || || || || ||
Sbjct 444815 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 444874
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | ||| ||||| || || |||| ||||| || ||||||||||||
Sbjct 444875 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 444922
Score = 114 bits (126), Expect = 9e-21
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | || || || | ||| || ||||| || ||||||||||||
Sbjct 445379 CCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGAC 445438
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| |||| ||||||||| || || ||||| | || | | ||| ||||| ||
Sbjct 445439 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445498
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|||||||| || || ||| || || ||| | || || || || | ||||||
Sbjct 445499 ATTCCTTCCTTATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACC 445558
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367
||||| || || ||||| || |||| ||| || || ||||| ||||| |||
Sbjct 445559 TCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTTTT 445609
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | || | || | ||| || ||||| || |||||||||||
Sbjct 444923 CCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGAC 444982
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| |||| ||||||| | ||| || |||||| | ||||| | ||||| || ||
Sbjct 444983 AGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGG 445042
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || ||||| || |||||| || ||| | || || || || || ||
Sbjct 445043 ATACCCTCTTTATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAACC 445102
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | ||| ||||| || || |||| ||||| || ||||||||||||
Sbjct 445103 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 445150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178908672106
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |