Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq64 113 7e-21 seq66 87.8 3e-13 >seq64 Length=816055 Score = 113 bits (124), Expect = 7e-21 Identities = 177/252 (70%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 ||||| ||| |||||||||||||||| ||||| |||||||| ||| | | || || | Sbjct 508388 AGATC-CTTAGAGATAACATCCAAGGTATCACTAAGCCAGCCATCAGAAGACTTGCCAGA 508330 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || ||| | | |||| || |||| |||||| | | | ||| | || Sbjct 508329 AGAGGTGGTGTTAAGAGAATTTCTGCTCTGATCTACGAAGAGGTCAGAGCTGTCCTCAAA 508270 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 ||| | ||| ||||||| |||||| | ||| || ||||||||||| | ||| Sbjct 508269 TCCTTTTTGGAGAACGTTATCAGAGATGCTGTTACCTACACAGAGCACGCTAAGAGAAAG 508210 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || || || ||| ||||| | ||||| || ||||| | ||||| | | | |||||| Sbjct 508209 ACCGTTACTTCCTTGGATGTTGTCTACGCTTTGAAGAGACAAGGAAGAACTTTGTATGGT 508150 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 508149 TTCGGTGGTTAA 508138 >seq66 Length=511978 Score = 87.8 bits (96), Expect = 3e-13 Identities = 174/254 (69%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| ||| |||||||||||||||| ||||| |||||||| ||| | | || || | Sbjct 172566 AGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCCATCAGAAGACTTGCCAGA 172508 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| |||||| | |||| | ||| | |||||||| | | | ||| | || Sbjct 172507 AGAGGTGGTGTCAAGAGAATCTCCGCTTTGATTTATGAAGAAGTGAGAGCTGTGCTCAA- 172449 Query 16568 ATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 ||| ||||| | | ||| || |||||| | ||| || |||||||| || | || Sbjct 172448 ATCGTTCCTTGAAAACGTGATTAGAGATGCTGTTACCTACACTGAGCACGCCAAGAGAAA 172389 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||| ||||| || |||| | || || || ||||| | || || | | | || || Sbjct 172388 GACCGTCACATCTCTGGACGTGGTTTACGCTTTGAAGAGACAGGGTAGAACCTTGTACGG 172329 Query 16687 TTTTGGAAGTTAAT 16700 ||| || |||||| Sbjct 172328 TTTCGGTGGTTAAT 172315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075139655738