Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq64 113 7e-21
seq66 87.8 3e-13
>seq64
Length=816055
Score = 113 bits (124), Expect = 7e-21
Identities = 177/252 (70%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| ||| |||||||||||||||| ||||| |||||||| ||| | | || || |
Sbjct 508388 AGATC-CTTAGAGATAACATCCAAGGTATCACTAAGCCAGCCATCAGAAGACTTGCCAGA 508330
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | | |||| || |||| |||||| | | | ||| | ||
Sbjct 508329 AGAGGTGGTGTTAAGAGAATTTCTGCTCTGATCTACGAAGAGGTCAGAGCTGTCCTCAAA 508270
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
||| | ||| ||||||| |||||| | ||| || ||||||||||| | |||
Sbjct 508269 TCCTTTTTGGAGAACGTTATCAGAGATGCTGTTACCTACACAGAGCACGCTAAGAGAAAG 508210
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| || || ||| ||||| | ||||| || ||||| | ||||| | | | ||||||
Sbjct 508209 ACCGTTACTTCCTTGGATGTTGTCTACGCTTTGAAGAGACAAGGAAGAACTTTGTATGGT 508150
Query 16688 TTTGGAAGTTAA 16699
|| || |||||
Sbjct 508149 TTCGGTGGTTAA 508138
>seq66
Length=511978
Score = 87.8 bits (96), Expect = 3e-13
Identities = 174/254 (69%), Gaps = 3/254 (1%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| ||| |||||||||||||||| ||||| |||||||| ||| | | || || |
Sbjct 172566 AGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCCATCAGAAGACTTGCCAGA 172508
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| |||||| | |||| | ||| | |||||||| | | | ||| | ||
Sbjct 172507 AGAGGTGGTGTCAAGAGAATCTCCGCTTTGATTTATGAAGAAGTGAGAGCTGTGCTCAA- 172449
Query 16568 ATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626
||| ||||| | | ||| || |||||| | ||| || |||||||| || | ||
Sbjct 172448 ATCGTTCCTTGAAAACGTGATTAGAGATGCTGTTACCTACACTGAGCACGCCAAGAGAAA 172389
Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686
||| ||||| || |||| | || || || ||||| | || || | | | || ||
Sbjct 172388 GACCGTCACATCTCTGGACGTGGTTTACGCTTTGAAGAGACAGGGTAGAACCTTGTACGG 172329
Query 16687 TTTTGGAAGTTAAT 16700
||| || ||||||
Sbjct 172328 TTTCGGTGGTTAAT 172315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075139655738
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |