Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq65 208 9e-49 seq45 201 1e-46 seq52 100 4e-16 >seq65 Length=94251 Score = 208 bits (230), Expect = 9e-49 Identities = 602/917 (66%), Gaps = 16/917 (2%) Strand=Plus/Minus Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250 || || |||||| ||| | || |||| | ||| || || || |||||||| || || Sbjct 84077 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 84018 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 || || ||||||| ||| ||||| || || ||||| | |||| || Sbjct 84017 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 83958 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | |||||| || ||||| || || | ||| | || | | |||||||| ||||| Sbjct 83957 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 83898 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 |||||||| || | |||||| |||||||| || | ||||||| ||||||||| || || Sbjct 83897 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 83838 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 ||| || | || ||||| || | ||| || || ||| | ||| || ||| Sbjct 83837 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 83778 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 ||||| || || || || || ||||| | || || || | ||||||||||| Sbjct 83777 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 83718 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610 || || ||| || || ||||| || | |||||| |||||| || || || Sbjct 83717 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 83658 Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 ||| || |||||||| | || || || ||||| || || |||||| || | || || Sbjct 83657 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 83598 Query 63671 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 63727 ||||||||| || |||| | | | ||| | ||| || || | || |||||||| Sbjct 83597 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 83541 Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63787 | ||||||||| ||||| || ||| || | || ||||| | || || || Sbjct 83540 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 83481 Query 63788 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847 || || || || |||||||||||||| |||||||||| ||||| | || | ||||| Sbjct 83480 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 83421 Query 63848 GAGTTTATCCTTATATTTGTTAACTATATCCATGGT--GATACTT--GAAATAATCGGAG 63903 || | || | | | || |||| ||| | | | | || || || || | Sbjct 83420 CAGCTCGTCGGCGTGCTCCTGGAC--AATCC--GGTACGTTTCGTCCGAGATCATTGGCG 83365 Query 63904 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 63963 || | || ||||| || || || | ||||| | | | | || | || | ||| Sbjct 83364 AAGGCTTGCCATTCTTGGGGTTGATATAGTGGTACAGCTGGTCAACGACCTGGGAAAACT 83305 Query 63964 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAAT 64023 | || | |||| |||||| || || || | ||||||||||||||| || |||| || | Sbjct 83304 GCTTGGTGGTTTGCTTGTGCAGGTTGGAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGT 83245 Query 64024 CCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACC 64082 | ||||| || || || || || || | |||||||| || | |||| || | Sbjct 83244 CGGGATGGATCGTGGT-CATGTAAGCGGCGGTCTCGGCTGCAAGGTTATCCAGCTCGATG 83186 Query 64083 GTTGTTACTCCATTATA 64099 || || || |||| ||| Sbjct 83185 GTGGTGACGCCATGATA 83169 >seq45 Length=88998 Score = 201 bits (222), Expect = 1e-46 Identities = 412/600 (69%), Gaps = 18/600 (3%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 || ||| || || ||| ||||||||||||||||| | || | ||||| || || || Sbjct 65116 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 65175 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 || || ||||| || || | ||| || ||||| || || || || || || ||||| || Sbjct 65176 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 65235 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT-----G 33474 ||| || || || || |||||||| |||| |||||||| || ||| || ||| | Sbjct 65236 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 65293 Query 33475 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33533 || | ||||| || || ||||| |||||||||| || | ||| || || || || || Sbjct 65294 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 65352 Query 33534 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33593 ||| || || || | | ||| ||| || || || || || ||||||| ||| Sbjct 65353 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 65412 Query 33594 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653 ||| ||||||| || ||||| || || ||||| || ||||||||||| | ||||| Sbjct 65413 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 65472 Query 33654 GGTAATCTGTACTTCTGTACAAAATCGTTC-CG-CCAAATTTTCATTCACTATTCCGTCA 33711 | || || || || | | | || |||| || |||| || || || || || ||||| Sbjct 65473 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 65530 Query 33712 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 33768 || ||||| || ||||| || | ||| ||| | |||| || ||| ||| Sbjct 65531 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 65589 Query 33769 -TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 33827 || ||||| || | | || || || | ||| | ||| || | ||||| || || || Sbjct 65590 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 65649 Query 33828 CTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 ||||||||| || ||||| | ||| || || | || | ||| ||||| | ||||| || Sbjct 65650 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 65709 >seq52 Length=883241 Score = 100 bits (110), Expect = 4e-16 Identities = 331/503 (66%), Gaps = 20/503 (4%) Strand=Plus/Minus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 ||||||| || || |||||||| || ||| |||||| || || || || || || || | Sbjct 650428 ACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGCGTCTTTGTAGAGCA 650369 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 ||| || || || ||||| ||||||| ||| ||||| | ||| | | || | || Sbjct 650368 GGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGCATGCCACA-GTTTCTGGGCT 650310 Query 63088 TT-ATTATAGATTTGTATCTCCTTTCTCTTTCGTA--TAGTGTATACAATCGTT-CGAAC 63143 || | | || | || | | || | ||| || | |||| || | | | || Sbjct 650309 TTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGTTGTA---AAGCTTGACAAAT 650253 Query 63144 TCGTCTCCCCAAACATTGTCC---AATCCAGGACATTCATCC--GGACACATCAACGACC 63198 || ||||| || |||| | ||||||| ||| |||| ||| | | | ||| Sbjct 650252 TCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATCCTCGGAAAAA--AGGCACC 650198 Query 63199 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63258 ||||| || | || ||| | |||||| | ||| || ||||||||||| ||||| Sbjct 650197 ACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAAATA 650138 Query 63259 GATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 |||||| | | | ||| || ||||| || || | | ||| || |||||| | | Sbjct 650137 AATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAG-TCCAGGAACTCAAAC 650079 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | || | ||||||||| || || || ||| | | | || || | ||| ||||| || Sbjct 650078 ACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTTCCACCT 650019 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 ||||| | ||| | |||||| | ||| | ||| | ||| || | || ||||| ||| Sbjct 650018 TGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCCGTTGGAT 649959 Query 63438 ATACCATTGGTACCGGAGATATA 63460 ||||||| || || || || || Sbjct 649958 GTACCATTAGTTCCAGAAATGTA 649936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946686068560