Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq65 239 1e-57
seq57 111 4e-19
>seq65
Length=94251
Score = 239 bits (264), Expect = 1e-57
Identities = 592/878 (67%), Gaps = 24/878 (3%)
Strand=Plus/Plus
Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC-GC 363512
|| ||||| ||| | |||||||| || |||||||||||| || |||| | || ||
Sbjct 83526 CCCCAGCACATGGTCATGCGTGTGGCCATTGGTATCCATGGC---GATGACATTCCCAGC 83582
Query 363513 G--ATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568
| || || || || || || | || || | ||||| ||||| |||||||
Sbjct 83583 GTCATCGAGACGTACAACCTGAT--GTCGCAAAAATTCTTCACCCACGCGTCGCCAACTC 83640
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATGAAG 363627
||| ||||| || |||| | |||| ||||||||||| || |||||| | ||||||
Sbjct 83641 TGTTTAATGCCGGTACTCCTCATCCGCAGATGTCTTCCTG-TTTCTTGGTTGCCATGAAG 83699
Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687
||||| |||||||| || |||| |||||| || |||| |||||||| || |||||| |
Sbjct 83700 GACGACTCCATCGACGGCATCTATGACACCCTCAAGACCTGTGCTCTGATCTCCAAGGCT 83759
Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGC-G 363745
|| || || |||||| | || ||||| || | | ||| | |||||| ||| |
Sbjct 83760 GCTGGAGGCATTGGTCTGCACATTCACAACATTAGATCCACCGGGTC-TTACAT-CGCTG 83817
Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805
| || || || || || | |||| ||| | | ||||| |||| || || |
Sbjct 83818 GAACCAACGGCACGTCCAACGGCATCATTCCAATGGTGAGAGTGTTCAACAACACCGCCA 83877
Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865
| |||||||||||||| || ||||| || ||||||||| |||| | |||||
Sbjct 83878 GATACGTCGACCAGGGAGGCAACAAGCGGCCTGGCGCGTTTGCTCTGTACGTTGAGCCAT 83937
Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925
|| | ||||||||||| ||| | || ||||||| ||| || || ||||| |
Sbjct 83938 GGCACTCGGATATTTTTGACTTTATCGACATCCGGAAGAACCATGGTAAGGAGGAGATCA 83997
Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985
| || | || |||||| ||| || ||| || | |||| || ||| || | || || |
Sbjct 83998 GAGCCAGAGACCTGTTCCCTGCGCTGTGGATTCCAGACCTGTTCATGGAGAGAGTCGA-G 84056
Query 363986 CAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
|| | | | | ||| | || || | || ||| |||||| |||||||| || |
Sbjct 84057 CA-GAACGCTGAGTGGACGCTGTTCTCGCCTTCCGAGGCTCCAGGGCTTTCCGACGTGTA 84115
Query 364044 GGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101
|| ||||| | | | |||||| || | | || ||| ||| || | || ||
Sbjct 84116 CGGCGACGAGTTCAAGGAGCTCTACACCAGA--TACGAAAAGGAAGGCCGTGGACGCCAG 84173
Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161
|| | ||||||||||| |||| ||||| |||| | |||| || ||||| ||
Sbjct 84174 ACGGTCAAGGCACAGAAGCTGTGGTACGCCATTTTGGAGGCCCAGACGGAAACAGGCACG 84233
Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221
|| | ||| ||||||| || | |||||| |||| |||||||| || |||||||||
Sbjct 84234 CCATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAGAACCTTGGTATC 84293
Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281
|| || | || | || ||| ||| | || ||| | |||| || ||| |||
Sbjct 84294 ATCAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCAGAGGAGGTGGCC 84353
Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319
|| ||||| | ||||||||||| ||||| || || ||
Sbjct 84354 GTGTGTAATTTGGCGTCGATCGCCCTTCCAGCCTTCGT 84391
>seq57
Length=170889
Score = 111 bits (122), Expect = 4e-19
Identities = 246/358 (69%), Gaps = 16/358 (4%)
Strand=Plus/Plus
Query 111363 GAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTA 111422
|||||||| ||||||||| ||| ||| |||| || |||| | | || ||
Sbjct 158580 GAACTTCTCTGGTTTATTGCTGGAGAGACAGATGCCAAGAAACTGACCGAGAAGGGCGTC 158639
Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC 111482
||||| ||||| ||||||||||| | || | ||| || || | || || |||
Sbjct 158640 AAAATATGGGAAGGAAATGGATCTAGAGAGTATCTTGACTCGCTCGGCCTGACACACAGG 158699
Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA- 111541
||||| |||||||| ||||||||||| || |||||| | |||||||| ||||| ||
Sbjct 158700 CGGGAAGGAGATCTCGGTCCAGTTTACGGCTTCCAATGGAGACACTTTGGGGCAGAATAT 158759
Query 111542 --CAAAACC-ATGCACGACT-CATATGATTCACAGGGAACTGATCAATTACAGAATGTCA 111597
| | || || || |||| || | | || ||| || ||||| | || |||
Sbjct 158760 GTCGACGCCGATACA-GACTACACAGG---CAAAGGTTAC-GATCAGCTGGCCAAAATCA 158814
Query 111598 TTGATCAAATTAAGAA-CAACCCAACTTC--TCGTCGCATTATTATGAGTGCATGGAACC 111654
||||| | || |||| |||||| || | | | | |||||| |||| |||||||| |
Sbjct 158815 TTGAT-ACTTTGAGAACCAACCC--CTACGATAGAAGAATTATTTTGAGCGCATGGAATC 158871
Query 111655 CAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
| || || | | ||||| ||||||||||| ||| || | || |||||||||||
Sbjct 158872 CTCCGGCTTTCAAGGACATGGCTCTTCCACCATGCCATGTTTTCTGTCAGTTTTATGT 158929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352497851612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |