Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq65 239 1e-57 seq57 111 4e-19 >seq65 Length=94251 Score = 239 bits (264), Expect = 1e-57 Identities = 592/878 (67%), Gaps = 24/878 (3%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC-GC 363512 || ||||| ||| | |||||||| || |||||||||||| || |||| | || || Sbjct 83526 CCCCAGCACATGGTCATGCGTGTGGCCATTGGTATCCATGGC---GATGACATTCCCAGC 83582 Query 363513 G--ATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568 | || || || || || || | || || | ||||| ||||| ||||||| Sbjct 83583 GTCATCGAGACGTACAACCTGAT--GTCGCAAAAATTCTTCACCCACGCGTCGCCAACTC 83640 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATGAAG 363627 ||| ||||| || |||| | |||| ||||||||||| || |||||| | |||||| Sbjct 83641 TGTTTAATGCCGGTACTCCTCATCCGCAGATGTCTTCCTG-TTTCTTGGTTGCCATGAAG 83699 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 ||||| |||||||| || |||| |||||| || |||| |||||||| || |||||| | Sbjct 83700 GACGACTCCATCGACGGCATCTATGACACCCTCAAGACCTGTGCTCTGATCTCCAAGGCT 83759 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGC-G 363745 || || || |||||| | || ||||| || | | ||| | |||||| ||| | Sbjct 83760 GCTGGAGGCATTGGTCTGCACATTCACAACATTAGATCCACCGGGTC-TTACAT-CGCTG 83817 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 | || || || || || | |||| ||| | | ||||| |||| || || | Sbjct 83818 GAACCAACGGCACGTCCAACGGCATCATTCCAATGGTGAGAGTGTTCAACAACACCGCCA 83877 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | |||||||||||||| || ||||| || ||||||||| |||| | ||||| Sbjct 83878 GATACGTCGACCAGGGAGGCAACAAGCGGCCTGGCGCGTTTGCTCTGTACGTTGAGCCAT 83937 Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || | ||||||||||| ||| | || ||||||| ||| || || ||||| | Sbjct 83938 GGCACTCGGATATTTTTGACTTTATCGACATCCGGAAGAACCATGGTAAGGAGGAGATCA 83997 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 | || | || |||||| ||| || ||| || | |||| || ||| || | || || | Sbjct 83998 GAGCCAGAGACCTGTTCCCTGCGCTGTGGATTCCAGACCTGTTCATGGAGAGAGTCGA-G 84056 Query 363986 CAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 || | | | | ||| | || || | || ||| |||||| |||||||| || | Sbjct 84057 CA-GAACGCTGAGTGGACGCTGTTCTCGCCTTCCGAGGCTCCAGGGCTTTCCGACGTGTA 84115 Query 364044 GGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101 || ||||| | | | |||||| || | | || ||| ||| || | || || Sbjct 84116 CGGCGACGAGTTCAAGGAGCTCTACACCAGA--TACGAAAAGGAAGGCCGTGGACGCCAG 84173 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 || | ||||||||||| |||| ||||| |||| | |||| || ||||| || Sbjct 84174 ACGGTCAAGGCACAGAAGCTGTGGTACGCCATTTTGGAGGCCCAGACGGAAACAGGCACG 84233 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || | ||| ||||||| || | |||||| |||| |||||||| || ||||||||| Sbjct 84234 CCATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAGAACCTTGGTATC 84293 Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || || | || | || ||| ||| | || ||| | |||| || ||| ||| Sbjct 84294 ATCAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCAGAGGAGGTGGCC 84353 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || ||||| | ||||||||||| ||||| || || || Sbjct 84354 GTGTGTAATTTGGCGTCGATCGCCCTTCCAGCCTTCGT 84391 >seq57 Length=170889 Score = 111 bits (122), Expect = 4e-19 Identities = 246/358 (69%), Gaps = 16/358 (4%) Strand=Plus/Plus Query 111363 GAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTA 111422 |||||||| ||||||||| ||| ||| |||| || |||| | | || || Sbjct 158580 GAACTTCTCTGGTTTATTGCTGGAGAGACAGATGCCAAGAAACTGACCGAGAAGGGCGTC 158639 Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC 111482 ||||| ||||| ||||||||||| | || | ||| || || | || || ||| Sbjct 158640 AAAATATGGGAAGGAAATGGATCTAGAGAGTATCTTGACTCGCTCGGCCTGACACACAGG 158699 Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA- 111541 ||||| |||||||| ||||||||||| || |||||| | |||||||| ||||| || Sbjct 158700 CGGGAAGGAGATCTCGGTCCAGTTTACGGCTTCCAATGGAGACACTTTGGGGCAGAATAT 158759 Query 111542 --CAAAACC-ATGCACGACT-CATATGATTCACAGGGAACTGATCAATTACAGAATGTCA 111597 | | || || || |||| || | | || ||| || ||||| | || ||| Sbjct 158760 GTCGACGCCGATACA-GACTACACAGG---CAAAGGTTAC-GATCAGCTGGCCAAAATCA 158814 Query 111598 TTGATCAAATTAAGAA-CAACCCAACTTC--TCGTCGCATTATTATGAGTGCATGGAACC 111654 ||||| | || |||| |||||| || | | | | |||||| |||| |||||||| | Sbjct 158815 TTGAT-ACTTTGAGAACCAACCC--CTACGATAGAAGAATTATTTTGAGCGCATGGAATC 158871 Query 111655 CAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 | || || | | ||||| ||||||||||| ||| || | || ||||||||||| Sbjct 158872 CTCCGGCTTTCAAGGACATGGCTCTTCCACCATGCCATGTTTTCTGTCAGTTTTATGT 158929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352497851612