Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq64 111 1e-19
seq61 86.0 5e-12
seq23 82.4 6e-11
>seq64
Length=816055
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| || ||||| |||| ||||| |||||||| ||||| ||||||||||| |
Sbjct 728724 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 728665
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| || ||||||| | ||| || || || | || | | || ||||| |||
Sbjct 728664 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 728605
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| || |||||||| || | ||| || | | | |||||| | |||
Sbjct 728604 ATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACC 728545
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|||| ||||||||| |||||||||| || ||||| |||||||||||||||
Sbjct 728544 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTTG 728494
>seq61
Length=567400
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| ||||| || ||||||||||| ||||| ||||||| | ||| | ||
Sbjct 444707 CTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGATAACGTTCTACCG 444766
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| || | ||| || || || ||||||| | || ||||| || | || || ||
Sbjct 444767 TCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTA 444826
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||||| ||| || | | | |||||| || ||| || | |||||||
Sbjct 444827 TCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATG 444886
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| |||||||||| ||||| || ||||| |||||
Sbjct 444887 GTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 444921
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| |||| || ||||||||||| |||||||| |||| || ||| | ||
Sbjct 445163 CTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCG 445222
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| || | || || || ||| |||| || | || ||||| ||| | || || ||
Sbjct 445223 TCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTA 445282
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||||| ||| || | | | |||||| || ||| || | |||||||
Sbjct 445283 TCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATG 445342
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| |||||||||| ||||| || ||||| |||||
Sbjct 445343 GTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
>seq23
Length=343512
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| || || || |||| |||| ||||||||||| || ||||||||||| |
Sbjct 313250 CCACCTCTCAGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 313191
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || ||||||| | || || || || |||| || | || ||||| ||
Sbjct 313190 AGAGTTCTGCCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGG 313131
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||| ||||| || | ||| || | | | | |||||| | ||||
Sbjct 313130 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 313071
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| | |||||| || || |||||||| || ||||| || || ||||||
Sbjct 313070 TCGAGGGTGATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCATT 313023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087674157340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |