Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq45 212 7e-50 >seq45 Length=88998 Score = 212 bits (234), Expect = 7e-50 Identities = 510/764 (67%), Gaps = 27/764 (4%) Strand=Plus/Plus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 ||||| ||||| || | |||||| |||||| | || ||||| || || || ||| Sbjct 64955 TCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAGGTTGACA 65014 Query 92987 GGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || || |||||||| ||| | ||||| ||||| | ||||| || | | ||| | | Sbjct 65015 GGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCTCGGTGATGATCTTGAG 65073 Query 93046 TACTCTA---CTATTTGGTG-GTTTTTG---TACGACATAATTGTACATTAAGCACGCAA 93098 || | || ||||| | ||| ||| | ||| | | | | | || |||| Sbjct 65074 CACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGA--GCAGA-----CAGGCAA 65126 Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTA 93158 |||||||||| | ||| ||||||| | |||||||| || ||| || | ||| || | Sbjct 65127 AGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCA 65186 Query 93159 ACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTT 93218 |||||||| ||||||||||| || || || ||||| ||||| || || ||||| | Sbjct 65187 TCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCT 65246 Query 93219 CCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT----GCTGATC 93274 ||||||| ||||| || || | | |||||||| || || || | ||||| Sbjct 65247 CCACGGCAGCAAACGCAACGAGTCTCTCGGCAAA----CAGGGCTTCCTCGTCGTTGATC 65302 Query 93275 CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAAT 93334 ||| | | ||||| ||||| || | ||| ||||| || | || || || ||||| || Sbjct 65303 CATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTGAAA 65362 Query 93335 AGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCA 93394 ||| | || || | | || | ||| || ||||| | || || ||| |||| Sbjct 65363 AGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGTACGTTTCC 65422 Query 93395 GAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGC 93454 || |||| |||||||| || ||||| ||||||||||| | || || | | ||| Sbjct 65423 GAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAGGAACTTGC 65482 Query 93455 ACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514 || || ||| || |||| || | || || ||||| || || || || || ||||| Sbjct 65483 ACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCAAAG 65542 Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATCCCAATCG 93571 || ||||| | | | ||| | | |||| | || || || || | ||| ||| Sbjct 65543 AAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTGTTCCAGTCG 65602 Query 93572 GATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTG 93631 || || || || ||||||| ||| || | ||||| ||||| || ||||| || ||| Sbjct 65603 TGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTCTGCCTTCTTG 65662 Query 93632 TACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||| | ||| || || || || | || || || | |||||| Sbjct 65663 TACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAA 65706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860340589840