Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq64 187 5e-42
seq61 176 8e-39
seq23 163 5e-35
seq45 145 1e-29
>seq64
Length=816055
Score = 187 bits (206), Expect = 5e-42
Identities = 169/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||| || | |||||||||||||||||||| || || || || || || || || ||
Sbjct 728706 ACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCCTCG 728647
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| |||||||| || | |||||| ||||| || || || ||||| ||||||||
Sbjct 728646 AGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCTTTGTCTTGG 728587
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| ||||||||||| | || || || |||||||||||||| |||
Sbjct 728586 ATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGTGATGGTCTTT 728527
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || | |||||||||||| ||||||||| ||
Sbjct 728526 CCGGTCAAGGTCTTGACGAAAATCTGCATTTTG 728494
>seq61
Length=567400
Score = 176 bits (194), Expect = 8e-39
Identities = 165/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| | || |||||||| || ||||| |||||||| || || || || ||||||
Sbjct 445397 ACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCT 445456
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || || || ||||||||||| ||||| || || || |||||||| ||||||
Sbjct 445457 AGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGA 445516
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||| ||||| ||||| | |||||||| || || ||||| |||||
Sbjct 445517 ATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTG 445576
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | ||||| ||||| |||||||||
Sbjct 445577 CCGGTCAAAGTCTTAACGAAAATCTGCATT 445606
Score = 163 bits (180), Expect = 5e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||| ||| | || ||||| ||||| ||||| |||||||| || || || || ||
Sbjct 445165 CAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTC 445224
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| |||||| || || || ||||||||||| ||||| || || || |||||||| ||
Sbjct 445225 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATC 445284
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | |||||| ||||| ||||| | || || || || | |||||||||
Sbjct 445285 TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 445344
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || | ||| || ||||| || |||||
Sbjct 445345 CTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || || || || || || || ||||| |||||||| || || || || ||
Sbjct 444481 CAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTC 444540
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| |||||| || || || ||||||||||| ||||| || || || |||||||| ||
Sbjct 444541 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATC 444600
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||| || | ||||||| ||||| ||||| | || || || || | |||||||||
Sbjct 444601 CTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 444660
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || | ||| || ||||| || |||||
Sbjct 444661 CTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 444693
>seq23
Length=343512
Score = 163 bits (180), Expect = 5e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | |||||||| || |||||||| || || || || || || || || ||
Sbjct 313232 ACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 313173
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || ||||| || |||||||| ||||| ||||| || || |||||||| ||
Sbjct 313172 AGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGG 313113
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| ||||||||||| | || || || || | |||||| || ||
Sbjct 313112 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTA 313053
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || |||||||||||||| || ||||||
Sbjct 313052 CCGGTCAGGGTCTTGACGAAGATTTGCATT 313023
>seq45
Length=88998
Score = 145 bits (160), Expect = 1e-29
Identities = 299/442 (68%), Gaps = 12/442 (3%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||||||||||||||||||||| || || || | |||||||||||||| |||||| |
Sbjct 64816 CATGACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGC 64875
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || ||| |||||||||||| || ||||| |||| | ||||| | | ||
Sbjct 64876 AAGAGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCC 64935
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
|| | | | | |||||||| || ||||| | |||||||| |||||||| ||||
Sbjct 64936 CAGAGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTT 64995
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT---CCTTTTCGTTGGCGAC 10171
||| || | || | | || | ||||||| |||||| ||||||| | ||||
Sbjct 64996 CATACCCAGCAGGTTGACAGGCAGGGCGTCG---GTGAAGTATCTCTTTTCGATCTCGAC 65052
Query 10172 CGCTTCCTCGACGATGCTCTTTACCAC---GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228
| ||||| |||| |||| | ||| ||| | | |||| | ||| | |||
Sbjct 65053 GG---CCTCGGTGATGATCTTGAGCACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGA 65109
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
| || || |||| | || || |||||||| | || ||| |||||||| ||
Sbjct 65110 GAAGAGCAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGA 65169
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348
|| |||||| ||||| || || | || |||||||| || | | ||||| ||
Sbjct 65170 GAAGGTCAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCC 65229
Query 10349 GGAGAACAGAAGACCCTCCACG 10370
||||| | || ||||||||||
Sbjct 65230 AGAGAAGAAAATACCCTCCACG 65251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621639661520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |