Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq64 187 5e-42 seq61 176 8e-39 seq23 163 5e-35 seq45 145 1e-29 >seq64 Length=816055 Score = 187 bits (206), Expect = 5e-42 Identities = 169/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || | |||||||||||||||||||| || || || || || || || || || Sbjct 728706 ACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCCTCG 728647 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| |||||||| || | |||||| ||||| || || || ||||| |||||||| Sbjct 728646 AGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCTTTGTCTTGG 728587 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||||| ||||||||||| | || || || |||||||||||||| ||| Sbjct 728586 ATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGTGATGGTCTTT 728527 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || | |||||||||||| ||||||||| || Sbjct 728526 CCGGTCAAGGTCTTGACGAAAATCTGCATTTTG 728494 >seq61 Length=567400 Score = 176 bits (194), Expect = 8e-39 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || |||||||| || ||||| |||||||| || || || || |||||| Sbjct 445397 ACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCT 445456 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || || || ||||||||||| ||||| || || || |||||||| |||||| Sbjct 445457 AGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGA 445516 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||| ||||| ||||| | |||||||| || || ||||| ||||| Sbjct 445517 ATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTG 445576 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | ||||| ||||| ||||||||| Sbjct 445577 CCGGTCAAAGTCTTAACGAAAATCTGCATT 445606 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||| ||| | || ||||| ||||| ||||| |||||||| || || || || || Sbjct 445165 CAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTC 445224 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| || || || ||||||||||| ||||| || || || |||||||| || Sbjct 445225 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATC 445284 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || | |||||| ||||| ||||| | || || || || | ||||||||| Sbjct 445285 TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 445344 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || | ||| || ||||| || ||||| Sbjct 445345 CTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377 Score = 159 bits (176), Expect = 6e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || || || || || || || ||||| |||||||| || || || || || Sbjct 444481 CAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTC 444540 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| || || || ||||||||||| ||||| || || || |||||||| || Sbjct 444541 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATC 444600 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||| || | ||||||| ||||| ||||| | || || || || | ||||||||| Sbjct 444601 CTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 444660 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || | ||| || ||||| || ||||| Sbjct 444661 CTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 444693 >seq23 Length=343512 Score = 163 bits (180), Expect = 5e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| | |||||||| || |||||||| || || || || || || || || || Sbjct 313232 ACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 313173 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || ||||| || |||||||| ||||| ||||| || || |||||||| || Sbjct 313172 AGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGG 313113 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||||| ||||||||||| | || || || || | |||||| || || Sbjct 313112 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTA 313053 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || |||||||||||||| || |||||| Sbjct 313052 CCGGTCAGGGTCTTGACGAAGATTTGCATT 313023 >seq45 Length=88998 Score = 145 bits (160), Expect = 1e-29 Identities = 299/442 (68%), Gaps = 12/442 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||||||||||||||| || || || | |||||||||||||| |||||| | Sbjct 64816 CATGACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGC 64875 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || ||| |||||||||||| || ||||| |||| | ||||| | | || Sbjct 64876 AAGAGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCC 64935 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || | | | | |||||||| || ||||| | |||||||| |||||||| |||| Sbjct 64936 CAGAGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTT 64995 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT---CCTTTTCGTTGGCGAC 10171 ||| || | || | | || | ||||||| |||||| ||||||| | |||| Sbjct 64996 CATACCCAGCAGGTTGACAGGCAGGGCGTCG---GTGAAGTATCTCTTTTCGATCTCGAC 65052 Query 10172 CGCTTCCTCGACGATGCTCTTTACCAC---GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228 | ||||| |||| |||| | ||| ||| | | |||| | ||| | ||| Sbjct 65053 GG---CCTCGGTGATGATCTTGAGCACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGA 65109 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 | || || |||| | || || |||||||| | || ||| |||||||| || Sbjct 65110 GAAGAGCAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGA 65169 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 || |||||| ||||| || || | || |||||||| || | | ||||| || Sbjct 65170 GAAGGTCAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCC 65229 Query 10349 GGAGAACAGAAGACCCTCCACG 10370 ||||| | || |||||||||| Sbjct 65230 AGAGAAGAAAATACCCTCCACG 65251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621639661520