Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq45 334 1e-86 seq65 279 1e-69 >seq45 Length=88998 Score = 334 bits (370), Expect = 1e-86 Identities = 608/877 (69%), Gaps = 32/877 (4%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| || || ||| |||||||||||||| || ||| ||||||||| Sbjct 65691 ATCAAGTACCACGAGATTTGGCAGATGTACAAGAAGGCAGAGGCCTCGTTCTGGACCGCA 65632 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCT----GAGAACGA 42400 ||||| || || ||| |||||||| | || |||| | || | || || ||||| Sbjct 65631 GAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACA-ACAGACTCAACGACAACGA 65573 Query 42401 AAAGT--TTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAAT 42458 | | ||| || | | | |||||||||| || || || |||||||| ||||| Sbjct 65572 GAGATACTTTGTTTCGAGAGTGT--TGGCCTTCTTTGCTGCTTCGGACGGCATTGTCAAC 65515 Query 42459 GAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTA 42517 |||||| ||| | | ||| |||||||| || | | ||||| || ||||| Sbjct 65514 GAGAACTTGGTCGAGAACTTCTCTGCCGAGGTGCAAGTTCCT-GAGGCCAAGTGTTTCTA 65456 Query 42518 CGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACAC 42577 ||| |||||||| || |||||| | ||||| || |||| | ||| || |||| Sbjct 65455 CGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTTCTGATCGACAC 65396 Query 42578 GTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTG 42637 ||| || ||| || || | | || ||||| ||||| ||||| || || || Sbjct 65395 CTACGTCAAGGACCCTAAGGAAGCTGAGTTCCTTTTCAACGCCATTGAGACCATCCCATG 65336 Query 42638 CATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGT 42693 |||||| ||||||| || ||||| | | |||||| | ||| || || || Sbjct 65335 TATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCAACGACGAG----GAAGCCCTGT 65280 Query 42694 TCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCG 42753 | | |||||| || || || ||| | ||||| ||||| || |||||||| ||| | || | Sbjct 65279 TTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTG 65220 Query 42754 CCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAA 42812 |||| ||||||||||||||| ||| ||| | |||||| || || |||||||||||||| Sbjct 65219 CCTCGATCTTCTGGCTCAAGAAGAGAGGACT-GATGCCTGGTCTGACCTTCTCGAACGAG 65161 Query 42813 CTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCAC 42872 | ||| |||| |||||||| ||||||| ||||||||||| || || |||||| ||| Sbjct 65160 TTGATCTGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTTCTCG---CAC 65104 Query 42873 CTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGC----CATCATCACGGAGGCCGTGGA 42928 |||| |||| | | | || |||| || || |||||||| |||||||| || Sbjct 65103 CTCA---ACAA-CACCCCAAACAGCGACATCGTGCTCAAGATCATCACCGAGGCCGTCGA 65048 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGA 42988 |||||| ||| | | |||| | | ||||| || |||| | || |||||| | | Sbjct 65047 GATCGAAAAGAGATACTTCACCGACGCCCTGCCTGTCAACCTGCTGGGTATGAACTGCAA 64988 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048 ||| |||||| ||||| | ||| || || |||| || || | |||| || Sbjct 64987 CCTGATGTGCCAGTACGTGGAGTTTGTTGCTGACCGGCTGCTTTTATCTCTGGGCTGCAA 64928 Query 43049 CCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108 | ||||||| | | ||| |||||||| |||||||||||||| | | ||||| Sbjct 64927 GAAGCACTACAACGCCACAAACCCGTTCGACTTCATGGAGAACATCTCTCTTGCAGGCAA 64868 Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||| ||||||||| | ||| |||| |||||| Sbjct 64867 GACCAACTTCTTCGAGAAGAGAGTCTCCGATTACCAG 64831 >seq65 Length=94251 Score = 279 bits (308), Expect = 1e-69 Identities = 1107/1716 (65%), Gaps = 57/1716 (3%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| |||| |||| | || | || |||| ||| || ||||||||||||||||||||| Sbjct 85291 ACGGTGAATTGGATCGCAGCAGCAGCAGCCTGGGTTCTGAGGTAGTACATGCCGGTCTTG 85232 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 ||||| | |||| | | || |||||| | ||||| ||| ||| | |||| Sbjct 85231 AGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAACTTGCCCATGGT------TGGG 85178 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTC 243915 | || | || || || | ||||| |||||||| | | | |||| | || Sbjct 85177 TT---CTTG---AGGTGGATATTCATCGACTGCGACTGGTCGATGTACG-CGCCTCTGTC 85125 Query 243916 TGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || |||||| ||| | | ||||| | ||||| | | || ||| | | ||| Sbjct 85124 GGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTACAGGTCCTT 85065 Query 243976 GAGGTGCTCGGGGAACCCTTCG-ATGTTCTGCACCGAGCCCTTGTG---GACGATGAGCT 244031 | | || | || || || | | |||||| | |||||| |||| || ||||| | Sbjct 85064 CAACTCCT-GTGGCACATTTGGCAAGTTCTGGATCGAGCCGTTGTCCTTGATGATGAAAT 85006 Query 244032 GGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGT 244091 | ||| |||||||||| || | | | || || | || || | || Sbjct 85005 TCTT---CATCGAGTCGTTCCACAATCCAAGGTTAACAAGGTCCCTCAGCAAGTACGGGT 84949 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 | || | ||| ||||| || | || || | | ||||| |||| | || |||| Sbjct 84948 TGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGGCT 84889 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| | ||| | | |||| ||||||| || ||| || ||||| || | ||||| Sbjct 84888 CGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCCACCA 84829 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271 || || || | || | | ||||||| ||| ||||| || ||||||||||| Sbjct 84828 AGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCACA 84769 Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT-GCTG 244330 || ||| | || | | |||||| | ||| ||||||| | |||| | | Sbjct 84768 -----GATCGGT--TGGCTTCTT--GCCCCAAAGGTCGAACTGCAAAATACCCTGCGACG 84718 Query 244331 ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCTC 244389 ||| | | ||||| ||||| ||| || || | |||||||| ||| | Sbjct 84717 CCGGCGAT-CCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGAGGCC 84659 Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGC 244448 || | || ||| ||||||||||||||| ||| |||||| || | ||||| || Sbjct 84658 -TCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCTGG 84600 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | || || || | | || | |||||| ||||||||||| ||||| || || | | Sbjct 84599 TG-AGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGG 84541 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 | || || |||| ||| ||||||| | || || || || || ||| |||| | || Sbjct 84540 CAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGT 84481 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 |||| | |||||||||||| |||| | | || | | |||| | |||| Sbjct 84480 CGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGT 84421 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCA-CAAACTCGTTGAGGGCGACGCTG 244687 |||| | || || ||| || || |||| | || | ||||||| Sbjct 84420 TGTACCAGCTGGTATTGTCGTCG-----GA--CTCAACGAAGGCTGGAAGGGCGATCGAC 84368 Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCG-AGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 |||| || || |||||||||||||| | || || ||||| |||||| ||| ||| | Sbjct 84367 GCCAAATTACACACGGCCACCTCCTCTGGAGATGA-GTACTCGACAATTTCGCAGCACAA 84309 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 ||| |||||||| | || |||| || || |||| ||||| ||||||||||||||| Sbjct 84308 ATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTT 84249 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||| |||||||| ||| || || || |||||| | | | | || ||| || | Sbjct 84248 GTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTT 84189 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 | |||||||||||| ||| | ||| || ||||| | |||||| || ||| Sbjct 84188 CTGTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTT 84129 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCAC---GACGCCGGGCACATGAGACT 244983 ||||||| ||| | || ||| || || || | || | || | ||| | | Sbjct 84128 GAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACA---GCGT 84072 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 |||||| || | || ||| |||| |||||| ||||| || ||||| || || |||| Sbjct 84071 CCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAA 84012 Query 245044 GAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101 ||||| |||| ||||| ||| ||| ||| |||||||| | || | ||||||| Sbjct 84011 CAGGTCTCTGG--CTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCA 83954 Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161 || | || |||||| ||||| | ||| | ||| | ||||| ||||||||||||||| Sbjct 83953 AAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCT 83894 Query 245162 CCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 |||||||| || || || |||||| | | || | || | |||||||| Sbjct 83893 CCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTG 83834 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281 || ||||||||| || |||||| | || || || | |||| ||| || Sbjct 83833 GACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA 83774 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | || || || ||||||||| || || ||| |||||| |||||| ||||| Sbjct 83773 CCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCG 83714 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || ||| ||| ||||||| | || || ||||| |||| ||| || | || | Sbjct 83713 TCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTA 83654 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | || |||||||| || |||||||| ||| Sbjct 83653 CCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAG 83618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338420920160