Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq64 122 2e-22 seq23 114 3e-20 seq61 105 2e-17 >seq64 Length=816055 Score = 122 bits (134), Expect = 2e-22 Identities = 168/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| || || | ||| | ||| ||||||||||| || ||||| | Sbjct 728724 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 728665 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 || || | ||||| || | ||| || || |||||||||| | |||| | || | Sbjct 728664 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGA--- 728608 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||||||||| || ||||| || | || ||||| || || | ||| || || Sbjct 728607 GGGATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCG 728548 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || | ||||| ||||| ||||||| ||||||||||| ||||||||| || Sbjct 728547 ACCTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTTG 728494 >seq23 Length=343512 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| || || || || | ||| || || ||||| || ||||| | Sbjct 313250 CCACCTCTCAGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 313191 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | || || || ||||| ||||| | || || | |||| Sbjct 313190 AGAGTTCTGCCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGG 313131 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || |||||||| || | || ||||| || || | ||| || || || Sbjct 313130 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 313071 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| ||||| |||||||| ||||||||||| || |||||| Sbjct 313070 TCGAGGGTGATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCATT 313023 >seq61 Length=567400 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || || || || | || || | |||||||| | ||| || || ||||| Sbjct 444959 TCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAA 445018 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||||| | ||||| || ||||||||||| ||||| | |||||| || Sbjct 445019 ATCAATCTCTGTTGATCAGGCGGGATACCCTCTTTATCCTGAATTTTAGATTTCACATTA 445078 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || || || || ||||| ||||| ||||||| || || ||| Sbjct 445079 TCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACG 445138 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 445139 AAAATTTGCAT 445149 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || || || |||| || || | |||||||||| || || || || || Sbjct 445415 TCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAA 445474 Query 288343 ATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | |||| | || | ||||||||||| ||||| || || |||| ||| || Sbjct 445475 ATGAGTCTTTGCTGGTCAGGA---GGGATTCCTTCCTTATCTTGAATCTTCGATTTGACA 445531 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| || |||||||| || | ||||| || || ||||||| |||||| Sbjct 445532 TTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTA 445591 Query 288460 ACGAATATCTGCATT 288474 ||||| ||||||||| Sbjct 445592 ACGAAAATCTGCATT 445606 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || |||||||||| | ||| | |||||||| | ||| || || ||||| Sbjct 444731 TCCTTTTGAATGTTATAGTCGGATAACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAA 444790 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | || || | ||||||||||| ||||| || ||||| | || || || Sbjct 444791 ATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTA 444850 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || || || || ||||| ||||| ||||||| || || ||| Sbjct 444851 TCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACG 444910 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 444911 AAAATTTGCAT 444921 Score = 89.7 bits (98), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || | ||||| || ||| || || || || || |||| Sbjct 444467 CCACCTCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGAC 444526 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | |||||||||| || || || || || || || | || || | ||| Sbjct 444527 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGG 444586 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| |||||||| ||||| | || ||||| || |||| || || || || Sbjct 444587 ATTCCTTCCTTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACC 444646 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || |||| || || ||||| || ||||| Sbjct 444647 TCAAGGGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 444693 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || || |||| || || | |||||||||| || || || || || Sbjct 445187 TCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAA 445246 Query 288343 ATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | |||| | || | ||||||||||| ||||| || ||||| | || || Sbjct 445247 ATGAGTCTTTGCTGGTCAGGA---GGGATTCCTTCCTTATCTTGAATTTTGGACTTGACA 445303 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| || || || || || || ||||| ||||| ||||||| || || Sbjct 445304 TTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTA 445363 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 445364 ACGAAAATTTGCAT 445377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653402454748