Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq61 113 1e-19 seq30 95.1 3e-14 >seq61 Length=567400 Score = 113 bits (124), Expect = 1e-19 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 334130 GGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCC 334189 ||| ||||| | ||||| || || || ||||| | | | || || ||||| || Sbjct 484389 GGAACCGTCAATGTCGTGCTCAACATAGACAGTTCTACATTCTTCTTGAGTTGGGAAACC 484330 Query 334190 TTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCC 334249 ||| | |||||||| ||||||| | ||||||||| || ||||| || |||||||| || Sbjct 484329 TTCGACTTGACCGTTGGCAATAGCCCTCATCAGAGTAGACTTACCAGCACCGTTTGGACC 484270 Query 334250 ACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTT 334309 || |||||||| | | | | ||||| | | | || ||||||| | || || Sbjct 484269 GCAAAGACCGTATCTTCTAGCTCTCTTCAATCTAAGTTGAGTCTTGTTCAATAAGATCTT 484210 Query 334310 TCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||||| |||||||| || ||||| | ||| ||||||||||| Sbjct 484209 GGCACCATAAGCCAGAGAGAACTCACAGTTACAGAGATCCTCACC 484165 >seq30 Length=286775 Score = 95.1 bits (104), Expect = 3e-14 Identities = 182/268 (68%), Gaps = 3/268 (1%) Strand=Plus/Minus Query 333726 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 333785 || || |||||||||| || |||||||| | | ||| || ||| ||| || || Sbjct 188480 TTGACAAACTCGGACAAGTTGCCCTTGTAGTACACCAGTTTCTTGTT---TTCATAGTGT 188424 Query 333786 ATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAA 333845 || | ||||| |||| ||| | || || || ||||| || ||||||| ||| Sbjct 188423 ATGACGTCAGTGCAGACAGTGTCCAAAAATCCAGAATCGTGCGAAACAATCAGAGACGTG 188364 Query 333846 ACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGG 333905 | || | | | | ||||| || ||||| |||| || || ||| |||||| Sbjct 188363 ATATCTGTGTGCTGAACTAGGTAATCTTCAAGCCATTTCACATTGGAAACATCCAGATGG 188304 Query 333906 TTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCG 333965 ||||| |||||||| ||||| || | | || |||| ||||| || | ||||| | Sbjct 188303 TTGGTTGGCTCGTCGAGAAGCAGAACGTCAGCCTTCATAAGCATGGCTCTCGCAAGTTCA 188244 Query 333966 AGTTTCATTTTCCACCCTCCTGAAAGAG 333993 || ||||| ||||| |||||||| |||| Sbjct 188243 AGCTTCATCTTCCATCCTCCTGAGAGAG 188216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879067377100