Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq65 338 7e-88 seq45 116 4e-21 >seq65 Length=94251 Score = 338 bits (374), Expect = 7e-88 Identities = 1185/1824 (65%), Gaps = 47/1824 (3%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 |||| | || |||||||||||| || |||||||| || | ||||||| |||| | ||| Sbjct 85264 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 85205 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 ||||| | ||||||| | ||||| | | | | || ||||| || || || Sbjct 85204 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGG 85145 Query 113708 TCGATGAA-GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 113766 |||||| | ||| || | || |||||||| || || | ||| | || ||||| Sbjct 85144 TCGATGTACGCG-CCTCTGTCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCA 85086 Query 113767 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCC 113826 || || | ||| |||| ||| | || | ||| | || | || ||||| ||||| Sbjct 85085 GACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAGCC 85026 Query 113827 ACCCGCCTTGACCATGAGATCCTTCAT--ATCCTTTGACCAGAGACCAATCTTTTTGAGA 113884 |||||| |||| || |||||| | | || ||| | |||| || || Sbjct 85025 GTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTT--CCACAATCCAAGGTTAACAAGG 84968 Query 113885 TCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 113944 ||| || | | | ||||| | |||||||| || || | ||| ||| Sbjct 84967 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 84908 Query 113945 ATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCT 114004 || |||| ||||| ||||| || ||||| || | ||||| || || | || || || Sbjct 84907 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 84848 Query 114005 GTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTG 114064 || ||||| || |||| | || || | ||| || | | | || || ||||| Sbjct 84847 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 84788 Query 114065 AGGGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTGCCACATA--TCAAACTGGAGG 114121 || | ||||||||| | || | ||| || | |||| || | || ||||| | Sbjct 84787 AGCGAGTCCCAGTCCCACA-GATCGGTTGGCTTCT--TGCCCCAAAGGTCGAACTGCAAA 84731 Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT--CCGCCA 114179 ||||| || || || |||||||||||||| ||||||||| ||| || ||| | |||| Sbjct 84730 ATACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATC--CCTAACGGCCA 84673 Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239 |||| ||||| | || |||| || || ||||| ||||| | |||| Sbjct 84672 GCTCGGCAGAGGCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCT 84613 Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 114299 | ||||||| || ||||| | |||| | || || || || || || || | Sbjct 84612 CTCTGGCCTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCT 84553 Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGA 114358 ||||||| | | |||| || | | | ||| || || ||| || ||| | | ||| Sbjct 84552 GGACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGA 84494 Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418 ||| | || || ||||| | | | || || || || ||||||||||| ||||| | || Sbjct 84493 TAATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGC 84434 Query 114419 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGG----AAGGGCG 114472 ||||||||| | | | | || || | || | | | || ||| ||||||| Sbjct 84433 AGCTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCG 84374 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || ||||||| ||||||||| | ||| || | | |||||| | |||||| Sbjct 84373 ATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAG 84314 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 |||||||| || ||| ||| | || | |||||| || || | ||| | ||| || || Sbjct 84313 CACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCG 84254 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 114652 |||||||| |||||| ||||||| || || ||||| |||| || | ||| || | ||| Sbjct 84253 TCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCAC 84194 Query 114653 A-CATCGGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 114709 | | || | | || | || || ||||| | || || |||| ||||| | |||||| Sbjct 84193 AGCTTCTGTGCCTTG-ACCGTCTGGCGTC--CACGGCCTTCCTTTTCGTATCTGGTGTAG 84137 Query 114710 AGGGCTTCAAACTCTTCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 114766 || | | ||||| || || |||| || || |||||||| |||| || || Sbjct 84136 AGCTCCTTGAACTCGTCGCCGTACACG---TCGGAAAGCCCTGGAGCCTCGGAAGGCGAG 84080 Query 114767 AAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGA 114826 || || | ||| | | | || ||| || | || |||||| |||||||| ||||| || Sbjct 84079 AACAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGC 84020 Query 114827 GCTGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 114885 || | ||| || || | | | || || || | | || || || || | || | Sbjct 84019 GCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCA-TGGTTCTTCCGGATGTCGAT 83961 Query 114886 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC------CGCGATTGACCCCTT 114939 |||||| | ||||||| |||||| || || | ||||| |||| | || ||| Sbjct 83960 AAAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTT 83901 Query 114940 ACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999 | | || |||||| || || || || ||| || || || | | ||||||||| Sbjct 83900 --GTTG-CCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAAT 83844 Query 115000 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG 115059 ||| || | || ||| || || || || |||| ||| ||| | | || Sbjct 83843 GATGCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTG 83784 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 ||||||| |||||| || || || ||| ||||| | || || | |||| || | Sbjct 83783 AATGTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTC 83724 Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 ||||| |||||||| ||||| |||| | || | | ||| ||| ||||| || || Sbjct 83723 ATAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG 83664 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 115239 || ||||| || || || || ||||| | ||||||| |||| | ||| ||||| Sbjct 83663 ATGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACAT 83604 Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | | ||| ||||| | |||| ||||||||| || || || ||||| || | || || Sbjct 83603 CAGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACG 83544 Query 115300 CATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTT 115359 ||| | ||||| |||||| | || | | ||||| | | || ||| || | Sbjct 83543 CATGACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG 83484 Query 115360 CTCCAAGGTCTTGAGACCAAAATA 115383 ||||| ||||||| |||||||| Sbjct 83483 CTCCAGCGTCTTGAAGCCAAAATA 83460 >seq45 Length=88998 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || || ||||||||||| | | |||| | || ||||||||| ||| || Sbjct 65122 GGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACC 65181 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| || || | |||||| | |||||| |||| ||| || || |||||||| || Sbjct 65182 AGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAAT 65241 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAA 126224 |||||||| || ||||||| ||| | ||| ||||| || || | | || || | Sbjct 65242 ACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAA-CAGGGCTTCCTCGTCGTTGA 65300 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCT 126272 ||| |||| ||||| | ||||| | || |||||| |||| ||||| Sbjct 65301 TCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCT 65348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353107183280