Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq23 125 8e-24
seq61 114 1e-20
>seq23
Length=343512
Score = 125 bits (138), Expect = 8e-24
Identities = 156/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||| ||||| ||| |||||| || || ||||| |||| ||||| | |||| ||
Sbjct 313232 ACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 313173
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
||||||||||||||||| || |||| |||||||| | ||| | | |||||||||| |
Sbjct 313172 AGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGG 313113
Query 42120 ATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
|| || |||| ||| | | | |||||| || ||||| |||| ||||| || ||
Sbjct 313112 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTT 313054
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || ||||| || ||||||||||||
Sbjct 313053 ACCGGTCAGGGTCTTGACGAAGATTTGCATT 313023
>seq61
Length=567400
Score = 114 bits (126), Expect = 1e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | || ||||| ||||| || ||| || ||||| |||||||| |
Sbjct 445378 ACCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGA 445437
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|||||| | |||| ||||||||||||||||| || ||||||| |||||||| | ||
Sbjct 445438 CAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGG 445497
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | ||||| | | ||| | || | ||||| | | | ||||| ||||| |
Sbjct 445498 GATTCCTTCCTTAT-CTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTA 445556
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
| || | ||||| |||||||| || | ||||| || || || ||||||||
Sbjct 445557 CCTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTTT 445608
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| |||| ||||| || |||||||||||| |||||||| |
Sbjct 445150 ACCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGA 445209
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|||||| | |||| ||||||||||||||||| || ||||||| |||||||| | ||
Sbjct 445210 CAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGG 445269
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | ||||| | | ||| |||| | |||| | | | ||||| || || |
Sbjct 445270 GATTCCTTCCTTAT-CTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAA 445328
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||| || || || | || || || || ||||||||
Sbjct 445329 CCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
Score = 104 bits (114), Expect = 3e-17
Identities = 172/246 (70%), Gaps = 2/246 (1%)
Strand=Plus/Plus
Query 41964 TATATATTAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTT 42023
|| ||| ||||| | ||| ||||| | | ||| |||||||| | || |||||
Sbjct 444449 TACATACTAATTCAGAAACCACCTCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTC 444508
Query 42024 TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGT 42083
||||| |||||||| | |||||| | |||| ||||||||||||||||| || ||||||
Sbjct 444509 TGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGT 444568
Query 42084 CGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCAC 42142
| |||||||| | || | | ||||| ||| ||| |||| | |||| | | |
Sbjct 444569 CTTTGCTGGTCAGGGGGGATTCCTTCCTTATCC-TGAATTTTGGACTTGACGTTATCGAT 444627
Query 42143 CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGAT 42202
||||| || || || || | |||||||| || || || | || || || || ||
Sbjct 444628 AGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAAT 444687
Query 42203 TTGCAT 42208
||||||
Sbjct 444688 TTGCAT 444693
Score = 86.0 bits (94), Expect = 7e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | || |||| ||||| || ||| || ||||| ||||||||||
Sbjct 444922 ACCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGA 444981
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|||||| | |||| || || |||||||||||||| || | || ||| || || | ||
Sbjct 444982 CAGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGG 445041
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | ||| || ||| ||| |||| | ||| | | | | ||||| || || |
Sbjct 445042 GATACCCTCTTTATCC-TGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAA 445100
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||| || || || | || || || || ||||||||
Sbjct 445101 CCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445149
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| |||| |||||| || |||||||||||| || || || |
Sbjct 444694 ACCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGA 444753
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
| || | |||| || || |||||||||||||| || |||| |||||||| | ||
Sbjct 444754 TAACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGG 444813
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | ||||| | | ||| |||| | |||| | | | ||||| || || |
Sbjct 444814 GATTCCTTCCTTAT-CTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAA 444872
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||| || || || | || || || || ||||||||
Sbjct 444873 CCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 444921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212351849440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |