Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq45 134 1e-26
seq65 129 6e-25
seq64 95.1 1e-14
seq61 89.7 5e-13
>seq45
Length=88998
Score = 134 bits (148), Expect = 1e-26
Identities = 332/497 (67%), Gaps = 9/497 (2%)
Strand=Plus/Minus
Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATG 52403
||||| | ||||| |||| |||||| | ||| ||| | | |||||| | |
Sbjct 65325 AAGGCCGAATGGGCCATGAGATGGATCAACGACGAGGAAGCCCTGTTTGCCGAGAGACTC 65266
Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463
|| || || || || ||||| | || || || ||| |||||| | ||||| |
Sbjct 65265 GTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTGCCTCGATCTTCTGG 65206
Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523
| || | || ||| | ||||| || ||||| ||| ||||||||||| | | |||
Sbjct 65205 CTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTTCTCGAACGAGTTGATCTGCAGAGAC 65146
Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG 52583
|| || ||||| || |||||||| || || || | ||| | | | | | |
Sbjct 65145 GAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTTCT---CGCACCTCAACAACACCCCA 65089
Query 52584 GATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTT 52643
| |||| | || | || ||| ||||| || | ||||||||| | ||
Sbjct 65088 AACAGCGACATCGTGCTCAAGATCATCACCGAGGCCGTCGAGATCGAAAAGAGATACTTC 65029
Query 52644 ACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC-ATGTGCGAGTACAT 52702
|| | ||| ||||| ||| | |||||||| |||||| ||| | |||||| ||||| |
Sbjct 65028 ACCGACGCCCTGCCTGTCAACCTGCTGGGTATGAACT-GCAACCTGATGTGCCAGTACGT 64970
Query 52703 CGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGGCAGCCA-AAGTACTTCAACGCT 52760
|||||||| || || || ||| | | | ||| |||| || | ||| ||| ||||||
Sbjct 64969 GGAGTTTGTTGCTGACCGGCTGCTTTT--ATCTCTGGGCTGCAAGAAGCACTACAACGCC 64912
Query 52761 CGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAG 52820
|| ||||| || || ||| | ||||| || |||| |||||||||||||| ||||||
Sbjct 64911 ACAAACCCGTTCGACTTCATGGAGAACATCTCTCTTGCAGGCAAGACCAACTTCTTCGAG 64852
Query 52821 AAGCGAGTCGGCGAGTA 52837
||| ||||| ||| ||
Sbjct 64851 AAGAGAGTCTCCGATTA 64835
>seq65
Length=94251
Score = 129 bits (142), Expect = 6e-25
Identities = 192/270 (71%), Gaps = 2/270 (1%)
Strand=Plus/Minus
Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307
||||||||||||||| ||||| | | | | ||||||||| ||| |||| ||||||
Sbjct 83722 TAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGA 83663
Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATC 154367
| || || || ||| || || || |||||| || || | |||||| ||||
Sbjct 83662 TGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATC 83603
Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGA-TATCATCGCCGTGAATGCCGAGCGCGACGCG 154426
| | |||||| |||||| || || || | |||||||| || || || | || || ||
Sbjct 83602 AGGTTGTACGTCTCGATGACG-CTGGGAATGTCATCGCCATGGATACCAATGGCCACACG 83544
Query 154427 CATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATT 154486
||||| ||||||||| || | ||||||||| | ||||||||||||||||||
Sbjct 83543 CATGACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG 83484
Query 154487 TTCGAGGGTTTTGTAACCGAAATACTTGTA 154516
|| || || ||| | || ||||| |||||
Sbjct 83483 CTCCAGCGTCTTGAAGCCAAAATAGTTGTA 83454
>seq64
Length=816055
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || | || ||| ||||| | | ||||| ||||| |||||||||||
Sbjct 728724 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 728665
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | |||||||||||| ||||||| |||| | | || ||||| |||||
Sbjct 728664 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 728605
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||||||||| ||| || || | | || | |||||||| ||||| |||
Sbjct 728604 ATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACC 728545
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || || |||| || || || |||||||||||
Sbjct 728544 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 728498
>seq61
Length=567400
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||| | || | | | |||||||||||||||||||| ||| |
Sbjct 445151 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445210
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || || || ||||| | | | || || | || ||||| |||||
Sbjct 445211 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445270
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| || || ||| |||| | || | | || | ||||| | ||||| ||
Sbjct 445271 ATTCCTTCCTTATC-TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 445329
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || |||| ||||| || ||||| |||||
Sbjct 445330 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||| | ||| | | | ||||||||||||||||| ||||||
Sbjct 444695 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 444754
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| |||||||| ||||| | | || || | || ||||| || ||
Sbjct 444755 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 444814
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| || || ||| |||| | || | | || | ||||| | ||||| ||
Sbjct 444815 ATTCCTTCCTTATC-TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 444873
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || |||| ||||| || ||||| |||||
Sbjct 444874 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 444921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261990583520
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