Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq45 134 1e-26 seq65 129 6e-25 seq64 95.1 1e-14 seq61 89.7 5e-13 >seq45 Length=88998 Score = 134 bits (148), Expect = 1e-26 Identities = 332/497 (67%), Gaps = 9/497 (2%) Strand=Plus/Minus Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATG 52403 ||||| | ||||| |||| |||||| | ||| ||| | | |||||| | | Sbjct 65325 AAGGCCGAATGGGCCATGAGATGGATCAACGACGAGGAAGCCCTGTTTGCCGAGAGACTC 65266 Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463 || || || || || ||||| | || || || ||| |||||| | ||||| | Sbjct 65265 GTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTGCCTCGATCTTCTGG 65206 Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523 | || | || ||| | ||||| || ||||| ||| ||||||||||| | | ||| Sbjct 65205 CTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTTCTCGAACGAGTTGATCTGCAGAGAC 65146 Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG 52583 || || ||||| || |||||||| || || || | ||| | | | | | | Sbjct 65145 GAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTTCT---CGCACCTCAACAACACCCCA 65089 Query 52584 GATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTT 52643 | |||| | || | || ||| ||||| || | ||||||||| | || Sbjct 65088 AACAGCGACATCGTGCTCAAGATCATCACCGAGGCCGTCGAGATCGAAAAGAGATACTTC 65029 Query 52644 ACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC-ATGTGCGAGTACAT 52702 || | ||| ||||| ||| | |||||||| |||||| ||| | |||||| ||||| | Sbjct 65028 ACCGACGCCCTGCCTGTCAACCTGCTGGGTATGAACT-GCAACCTGATGTGCCAGTACGT 64970 Query 52703 CGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGGCAGCCA-AAGTACTTCAACGCT 52760 |||||||| || || || ||| | | | ||| |||| || | ||| ||| |||||| Sbjct 64969 GGAGTTTGTTGCTGACCGGCTGCTTTT--ATCTCTGGGCTGCAAGAAGCACTACAACGCC 64912 Query 52761 CGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAG 52820 || ||||| || || ||| | ||||| || |||| |||||||||||||| |||||| Sbjct 64911 ACAAACCCGTTCGACTTCATGGAGAACATCTCTCTTGCAGGCAAGACCAACTTCTTCGAG 64852 Query 52821 AAGCGAGTCGGCGAGTA 52837 ||| ||||| ||| || Sbjct 64851 AAGAGAGTCTCCGATTA 64835 >seq65 Length=94251 Score = 129 bits (142), Expect = 6e-25 Identities = 192/270 (71%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 ||||||||||||||| ||||| | | | | ||||||||| ||| |||| |||||| Sbjct 83722 TAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGA 83663 Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATC 154367 | || || || ||| || || || |||||| || || | |||||| |||| Sbjct 83662 TGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATC 83603 Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGA-TATCATCGCCGTGAATGCCGAGCGCGACGCG 154426 | | |||||| |||||| || || || | |||||||| || || || | || || || Sbjct 83602 AGGTTGTACGTCTCGATGACG-CTGGGAATGTCATCGCCATGGATACCAATGGCCACACG 83544 Query 154427 CATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATT 154486 ||||| ||||||||| || | ||||||||| | |||||||||||||||||| Sbjct 83543 CATGACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG 83484 Query 154487 TTCGAGGGTTTTGTAACCGAAATACTTGTA 154516 || || || ||| | || ||||| ||||| Sbjct 83483 CTCCAGCGTCTTGAAGCCAAAATAGTTGTA 83454 >seq64 Length=816055 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | || ||| ||||| | | ||||| ||||| ||||||||||| Sbjct 728724 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 728665 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | |||||||||||| ||||||| |||| | | || ||||| ||||| Sbjct 728664 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 728605 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| || || | | || | |||||||| ||||| ||| Sbjct 728604 ATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACC 728545 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| || || || ||||||||||| Sbjct 728544 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 728498 >seq61 Length=567400 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | |||||| | || | | | |||||||||||||||||||| ||| | Sbjct 445151 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445210 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || || || ||||| | | | || || | || ||||| ||||| Sbjct 445211 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445270 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| |||| | || | | || | ||||| | ||||| || Sbjct 445271 ATTCCTTCCTTATC-TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 445329 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || |||| ||||| || ||||| ||||| Sbjct 445330 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | |||||| | ||| | | | ||||||||||||||||| |||||| Sbjct 444695 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 444754 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| |||||||| ||||| | | || || | || ||||| || || Sbjct 444755 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 444814 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| |||| | || | | || | ||||| | ||||| || Sbjct 444815 ATTCCTTCCTTATC-TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 444873 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || |||| ||||| || ||||| ||||| Sbjct 444874 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 444921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261990583520