Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq61 104 2e-17
seq64 95.1 1e-14
seq23 89.7 5e-13
seq65 84.2 2e-11
>seq61
Length=567400
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| || ||||| || | ||||||||||| ||||| ||||||||| |
Sbjct 445379 CCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGAC 445438
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | | || |||||||| || ||||| | || | || ||||| || |||||
Sbjct 445439 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445498
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| || || ||| |||| | |||| ||||| | | || ||
Sbjct 445499 ATTCCTTCCTTATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACC 445558
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||||||||||||| ||| || || |||||||||||
Sbjct 445559 TCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCAT 445605
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| || |||| || | ||||||||||| ||||| |||||||| |
Sbjct 444923 CCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGAC 444982
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | || || || || || |||||| | ||||||| ||| ||||| || ||
Sbjct 444983 AGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGG 445042
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||| || ||| ||||| || | | |||| ||||| | ||| ||
Sbjct 445043 ATACCCTCTTTATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAACC 445102
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 445103 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445149
>seq64
Length=816055
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | | || || |||||||| | || ||||||||||| || ||||| ||
Sbjct 728724 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 728665
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | || || || || || || ||| ||||||||| ||||| || |||||
Sbjct 728664 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 728605
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || || ||||| ||| || ||||| | |||| |||||| | | ||||||
Sbjct 728604 ATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACC 728545
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || ||||||| || || || |||||||||||
Sbjct 728544 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 728498
>seq23
Length=343512
Score = 89.7 bits (98), Expect = 5e-13
Identities = 115/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || |||||| | |||| || ||||| || || || || |||||||||
Sbjct 313178 TCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTG 313119
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
||| ||| || ||||| |||| |||| |||||| | | ||| || |||| ||| |
Sbjct 313118 TCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 313060
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || |||||||| || || || || || |||||
Sbjct 313059 AGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCAT 313024
>seq65
Length=94251
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 147274 TAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGA 147333
||||||||||||||| ||| ||||| ||| || |||||| ||| |||| || |||
Sbjct 83722 TAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGA 83663
Query 147334 CGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACGTGCCCAGACTCATC 147393
|| || || || |||||| || || ||||| ||||| | ||||
Sbjct 83662 TGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATC 83603
Query 147394 AATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGC 147453
| | ||||| || ||| |||| || ||||||||| || || | | ||| || |||
Sbjct 83602 AGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGC 83543
Query 147454 ATGAGCATGTGCTGGGGTC 147472
|||| ||||||||||||||
Sbjct 83542 ATGACCATGTGCTGGGGTC 83524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500407711840
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