Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq61 109 5e-19
seq64 100 3e-16
seq65 95.1 1e-14
>seq61
Length=567400
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||||| || || |||||||| || ||||| ||| | ||| ||
Sbjct 444707 CTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGATAACGTTCTACCG 444766
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || || ||| | || | || ||||||||| || || || ||||| |||
Sbjct 444767 TCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTA 444826
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||||||||| |||| || | ||||| || ||||| || || || || |
Sbjct 444827 TCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATG 444886
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | ||||| || |||||||||||
Sbjct 444887 GTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 444921
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || || |||| || || |||||||| || || |||||| | ||| ||
Sbjct 445163 CTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCG 445222
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | || || || || | || | || ||||||||| || || || ||||| |||
Sbjct 445223 TCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTA 445282
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||||||||| |||| || | ||||| || ||||| || || || || |
Sbjct 445283 TCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATG 445342
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | ||||| || |||||||||||
Sbjct 445343 GTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| ||||| || | ||| || || |||||||| || || || |||||| | ||| ||
Sbjct 444476 AGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTA 444535
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | || || || || | || | || ||||||||| || || || |||||
Sbjct 444536 CCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCC 444595
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
||||| |||||||| |||| || | || | ||||| || ||||| || || || ||
Sbjct 444596 TTATCCTGAATTTTGGACTTGA-CGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGT 444654
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || || || | ||||| || |||||||||||
Sbjct 444655 GATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 444693
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|||| || || || || || || || |||||| | ||| || || || | ||
Sbjct 445403 TGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGC 445462
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | || | || ||||||||| || || || ||||| ||||||||||| ||
Sbjct 445463 TTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATCTTC 445522
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
||||| || | ||||| ||||| || || || | ||| | |||||||||||
Sbjct 445523 GATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTGCCGGTC 445582
Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340
| ||| || || ||||| |||||
Sbjct 445583 AAAGTCTTAACGAAAATCTGCAT 445605
>seq64
Length=816055
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| |||| || | ||||| || || || |||||||| || || || | |||| |
Sbjct 728715 AGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTG 728656
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | ||| || || ||| | ||||||| ||||||||| || || || ||||||
Sbjct 728655 CCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCT 728596
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| ||||| || || |||| || | || | |||||||||||||||||| || | ||
Sbjct 728595 TTGTCTTGGATCTTGGACTTGA-CGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGT 728537
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || ||||| | || || || ||||| |||||
Sbjct 728536 GATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 728498
>seq65
Length=94251
Score = 95.1 bits (104), Expect = 1e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665
||||| || ||||| | |||||| ||||| |||||||||||| || ||||| ||||
Sbjct 84222 GAAACAGGCACGCCATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAG 84281
Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCC 123725
||| | || | || || | |||| | |||| ||||||| |||| ||| | |
Sbjct 84282 AACCTTGGTATCATCAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCA 84341
Query 123726 GATCAAGTGGCCGTGTGTAATTTGGCTTCGAT 123757
|| | |||||||||||||||||||| |||||
Sbjct 84342 GAGGAGGTGGCCGTGTGTAATTTGGCGTCGAT 84373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002827097360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |