Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq65 352 3e-92 seq45 123 3e-23 >seq65 Length=94251 Score = 352 bits (390), Expect = 3e-92 Identities = 1185/1821 (65%), Gaps = 39/1821 (2%) Strand=Plus/Minus Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608 |||| | || |||||||||||| || |||||||| || | ||||||| |||| | ||| Sbjct 85264 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 85205 Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668 || || | ||||||| | ||||| | | | | || ||||| || || || Sbjct 85204 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGG 85145 Query 115669 TCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 115727 |||||| | ||| | | | || |||||||| || || | ||| | || ||||| Sbjct 85144 TCGATGTACGCGCCTCTG-TCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCA 85086 Query 115728 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCC 115787 || || | ||| |||| ||| | || | ||| | || | || ||||| ||||| Sbjct 85085 GACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAGCC 85026 Query 115788 ACCTGCCTTGACCATGAGATCCTTCAT--ATCCTTTGACCAGAGACCAATCTTCTTGAGA 115845 |||||| |||| || |||||| | | || ||| | |||| || || Sbjct 85025 GTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTT--CCACAATCCAAGGTTAACAAGG 84968 Query 115846 TCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 115905 ||| || | || | ||||| | |||||||| || || | ||| ||| Sbjct 84967 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 84908 Query 115906 ATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCT 115965 ||||||| ||||| ||||| || ||||| || | ||||| || || | ||| || || Sbjct 84907 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 84848 Query 115966 GTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTG 116025 || ||||| || |||| | || || | ||| || || | || || ||||| Sbjct 84847 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 84788 Query 116026 AGGGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTCCCACATATCAAACTGGAGGAT 116084 || | ||||||||| | || | ||| || | |||| | || ||||| | || Sbjct 84787 AGCGAGTCCCAGTCCCACA-GATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAAT 84729 Query 116085 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT--CCGCCAAT 116142 ||| || ||||| |||||||||||||| ||||| ||| ||| || ||| | |||| Sbjct 84728 ACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATC--CCTAACGGCCAGC 84671 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202 |||| ||||| | || |||| || || ||||| ||||| | |||| | Sbjct 84670 TCGGCAGAGGCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCT 84611 Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGG 116262 ||||||| || ||||| | || | | || || || || || || || ||| Sbjct 84610 CTGGCCTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGG 84551 Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGATA 116321 ||||| | | |||| || | | | ||| || || ||| || ||| | | ||||| Sbjct 84550 ACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGATA 84492 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 | | || || ||||| | | | || || || || ||||||||||| ||||| | || || Sbjct 84491 ATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAG 84432 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGG----AAGGGCGAT 116435 ||||||| | | | | || || | || | | | || ||| ||||||||| Sbjct 84431 CTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCGAT 84372 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 ||||||| ||||||||| | ||| || | | |||||| | |||||| || Sbjct 84371 CGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCA 84312 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 |||||| || ||| ||| | || | |||||| || || | ||| | ||| || || || Sbjct 84311 CAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTC 84252 Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA- 116614 |||||| ||||| ||||||| || || ||||| |||| || | ||| || | ||| | Sbjct 84251 CTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAG 84192 Query 116615 CATCGGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672 | || | | || | || || ||||| | || || |||| ||||| | |||||||| Sbjct 84191 CTTCTGTGCCTTG-ACCGTCTGGCGTC--CACGGCCTTCCTTTTCGTATCTGGTGTAGAG 84135 Query 116673 GGCCTCAAACTCTTCACCC-ACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGA 116731 ||| ||||| || || ||| | || || |||||||| |||| || |||| | Sbjct 84134 CTCCTTGAACTCGTCGCCGTACA-CGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACA 84076 Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791 | | ||| | | | || ||| || | || |||||| |||||||| ||||| ||||| | Sbjct 84075 GCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAG 84016 Query 116792 AGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 ||| || || | | | || || || | | || || || || | || | |||| Sbjct 84015 GGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCA-TGGTTCTTCCGGATGTCGATAAAG 83957 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACAC------CGCGATTGACCCCTTGCGA 116904 || | ||||||| |||||| || || | ||||| |||| | || |||| Sbjct 83956 TCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTG 83897 Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 | || ||||| || || || || || ||| || || | | |||||||||||| Sbjct 83896 CCTCC---CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATG 83840 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATG 117024 || | || ||| || || || || |||| | ||| ||| | | ||| ||| Sbjct 83839 CCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATG 83780 Query 117025 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAG 117084 |||| |||||| || || || ||| ||||| | || || | |||| || | ||| Sbjct 83779 TGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAG 83720 Query 117085 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTT 117144 || || ||||| ||||| |||| | || | | ||| ||| ||||| || || Sbjct 83719 ATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGA 83660 Query 117145 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 117204 || ||||| || || || || ||||| | ||||||| |||| | ||| |||||| Sbjct 83659 GGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGG 83600 Query 117205 TCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATA 117264 | ||| ||||| | ||| ||||||||| || || || ||||| || | || ||||| Sbjct 83599 TTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATG 83540 Query 117265 AACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCC 117324 | ||||| |||||| | || | | ||||| | | || ||| || | |||| Sbjct 83539 ACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTCC 83480 Query 117325 AAGGTCTTGAGACCAAAATAG 117345 | ||||||| ||||||||| Sbjct 83479 AGCGTCTTGAAGCCAAAATAG 83459 >seq45 Length=88998 Score = 123 bits (136), Expect = 3e-23 Identities = 158/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 || ||||||||||| | | |||| | || ||||||||| |||||| ||||| || || Sbjct 65135 TGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCT 65194 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 | |||||| | |||||| |||| ||| |||||||||||||| || |||||||| Sbjct 65195 CTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCA 65254 Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCGC 127710 || ||||||| || | ||||||||| || | | | || | | ||| |||| || Sbjct 65255 GCAAACGCAACGAGTCTCTCGGCAAA-CAGGGCTTCCTCGTCGTTGATCCATCTCATGGC 65313 Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGACGGTCT 127745 ||| | ||||| | || ||||||||||| ||||| Sbjct 65314 CCATTCGGCCTTCTCCTTGATACATGGGATGGTCT 65348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506693856560