Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq23 122 2e-22 seq64 114 3e-20 seq61 109 1e-18 >seq23 Length=343512 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| ||||| ||||| | ||| |||||||| |||| ||||||||||| | ||| || Sbjct 313241 AGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTG 313182 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || || || |||||||| || ||||| || || | |||||||| || ||||| || Sbjct 313181 CCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCC 313122 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| ||| |||| |||||| | | || || || | ||| Sbjct 313121 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 313062 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || ||||| Sbjct 313061 ATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTG 313027 >seq64 Length=816055 Score = 114 bits (126), Expect = 3e-20 Identities = 160/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||||||| || | || | ||| ||||| ||||||| ||||||||| | | || || Sbjct 728715 AGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTG 728656 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || || || || ||||| ||||||||||| | | |||||||| ||| ||||||||| Sbjct 728655 CCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCT 728596 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || ||||| ||| ||| |||| |||||| | | || || ||||| ||| Sbjct 728595 TTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGTG 728536 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || ||||| || || | || || || ||||| || |||||| Sbjct 728535 ATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTG---CATTTT 728495 >seq61 Length=567400 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || ||||| | |||||||||||||| | |||||| || | || ||| || || Sbjct 445162 TCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACC 445221 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| |||||||| || || || ||||| | |||||||| ||| |||||||| Sbjct 445222 GTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTT 445281 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||| || ||| || |||| ||||| | | || || || | ||||| Sbjct 445282 ATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGAT 445341 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || | ||||| || |||||||| Sbjct 445342 GGTCTTTCCGGTCAAGGTTTTAACGAAAATTTG 445374 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || || || | |||||||||||||| | ||| ||||| | || || || || Sbjct 444706 TCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGATAACGTTCTACC 444765 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| || ||||| || ||||| || || | |||||||| || |||||||| Sbjct 444766 GTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTT 444825 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||| || ||| || |||| ||||| | | || || || | ||||| Sbjct 444826 ATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGAT 444885 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || | ||||| || |||||||| Sbjct 444886 GGTCTTTCCGGTCAAGGTTTTAACGAAAATTTG 444918 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| || || || || |||||| | ||||| || || ||| || ||||||||||| Sbjct 444572 AAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACA 444513 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 201026 | ||||| || ||||||||||| | ||||||||||| Sbjct 444512 TTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACT 444476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920603074422