Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq45 273 2e-68
seq64 104 2e-17
seq23 100 3e-16
>seq45
Length=88998
Score = 273 bits (302), Expect = 2e-68
Identities = 567/830 (68%), Gaps = 27/830 (3%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAG-GAAATGAGCGTCATAAAATCCAAGGGGTT 132683
||||| || || || || || || | |||| || ||| | ||| || || || |||||
Sbjct 64850 TTCTCGAAGAAGTTGGTCTTGCC-TGCAAGAGAGATGTTCTCCATGAAGTCGAACGGGTT 64908
Query 132684 GGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743
| | |||||||||||| ||| | ||| | ||||||| ||| || || |||||
Sbjct 64909 TGTGGCGTTGTAGTGCTTCTTGCAGCCCAGAGATAAAAGCAGCCGGTCAGCAACAAACTC 64968
Query 132744 GATGTATTGCGACAT--GGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCG 132801
| ||| || |||| |||| ||| || | |||||||| || ||||| || |||
Sbjct 64969 CACGTACTGGCACATCAGGTT--GCAGTTCATACCCAGCAGGTTGACAGGCAGGGCGTCG 65026
Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG-C 132860
|||| | | | ||||| |||| || ||||||| ||| | | | || || | |
Sbjct 65027 GTGAAGTATCTCTTTTCGATCTCGACGGCCTCGGTGATGATCT---TGA-GCACGATGTC 65082
Query 132861 GCTC----GGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGC 132916
||| || |||| | ||| ||| | || || ||||||||| ||||| |
Sbjct 65083 GCTGTTTGGGGTGTTGTTG-AGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTATGCAGAC 65141
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||| ||| | || | ||||| ||| |||| || ||||| || || | || |
Sbjct 65142 CCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCTCTCTTCT 65201
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
||||||| || || | ||| || ||| || ||||| | ||||| ||||| || || |
Sbjct 65202 TGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCAGCAAACG 65261
Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096
| || || | |||| | ||| |||||| | | | |||||| | || ||||||||||
Sbjct 65262 CAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTCGTTGATCCATCTCATGGCCCATTCGG 65321
Query 133097 CCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA--AACGGAGTTTCTCTTC 133154
|||| || |||| || || || || || |||||||| || | ||| || ||| |||
Sbjct 65322 CCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTGAAAAGGAACTCAGCTTC-CTT- 65379
Query 133155 CGAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCC 133212
||| | |||||||||||||| || ||| ||| |||||||||| | |||||||
Sbjct 65380 --AGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGTACGTTTCCGAGTGGATGTTCTCC 65437
Query 133213 ATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA 133272
|| ||| || || ||||| || ||| ||||| || ||||| || || |||
Sbjct 65438 ATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAGGAACTTGCACCTCGGCAGAGAAG 65497
Query 133273 CGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGC 133332
|||||||| || |||||||| |||||||| || || || ||||||| ||| |
Sbjct 65498 TTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCAAAGAAGGCCAACACTCTC 65557
Query 133333 TTGATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGAC 133389
| || | | |||||||||||| | | | ||||||| || ||||||||||
Sbjct 65558 GAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTGTTCCAGTCGTGCAGGTCCTTGGAC 65617
Query 133390 AGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| || | ||||| ||||||| ||||| ||||| || || ||||||||
Sbjct 65618 AGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTCTGCCTTCTTGTACAT 65667
>seq64
Length=816055
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| || || | || || || ||||||||| | || |||||| |
Sbjct 728495 AAAATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCT 728554
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || || |||| |||||||| ||||| || | ||
Sbjct 728555 TCCGACACCATCGATAACG-TCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGA 728613
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| || | | || | ||| || || || || || |||| | ||||| |||||
Sbjct 728614 CCAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTA 728673
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| || | || |||||||||| ||| | ||||||| ||
Sbjct 728674 CAACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGG 728724
>seq23
Length=343512
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| || || || || || || || |||||| |||| || ||| | |
Sbjct 313023 AATGCAAATCTTCGTCAAGACCCTGACCGGTAAGACTATCACCCTCGAGGTGGAGTCTTC 313082
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
||||| | | | |||| | || || |||| ||||| |||||||| || | ||||
Sbjct 313083 CGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCTGACC 313141
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || | || |||| ||| || || ||||| || |||| | || || |||||||
Sbjct 313142 AGCAAAGACTGATTTTCGCTGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACA 313201
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| | || |||| |||| || | ||||||| ||
Sbjct 313202 ACATCCAGAAGGAGTCCACTTTGCACCTGGTCCTCAGACTGAGAGGTGG 313250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172387357440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |