Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq25 197 5e-45 seq55 149 2e-30 seq23 141 4e-28 seq61 138 4e-27 >seq25 Length=139420 Score = 197 bits (218), Expect = 5e-45 Identities = 796/1246 (64%), Gaps = 46/1246 (4%) Strand=Plus/Plus Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGT 451306 ||||||||||| | ||| || | ||||||||| | | |||||| | || | || Sbjct 11917 GAAGAAATTTCTGCCATGATTTTGGGCAAAATGAAACAGATTGCAGAAGACTACCTAGGA 11976 Query 451307 TCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAA 451366 ||| || | || || ||||||| || || || ||||||||||| ||| | ||| Sbjct 11977 AAGAAAGTGACCCACGCTGTCGTTACTGTCCCAGCATACTTCAATGATGCGCAAAGACAA 12036 Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 |||||||| ||||||||| ||||||||||| | ||||| ||||| |||| || || Sbjct 12037 GCAACTAAGGATGCAGGAACGATTGCTGGTTTGGAGGTTCTGAGAATTGTTAACGAGCCA 12096 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATT 451486 || ||||| ||| | |||||||| | ||| || | ||| || |||||| ||||| Sbjct 12097 ACCGCAGCAGCTATTGCATATGG-TTTGGATAA--GACAGA---CGAGGAAAAACATATT 12150 Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG 451546 |||| | |||||| |||||||| ||| |||| |||| | || | |||| | || Sbjct 12151 ATAGTCTATGATTTGGGTGGAGGTACTTTTGATGTTTCTCTCCTCACCATTGCTGGAGGA 12210 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 | ||||||||| ||| || |||||||||||| | || || || || |||| || Sbjct 12211 GCATTTGAAGTCTTGGCTACTGCGGGTGATACTCATTTGGGTGGAGAGGACTTTGACTAT 12270 Query 451607 GCAATTGTGGAATGGTTGAAAACTGATGTTCAACGA-AAACTAAAAGTAGATATTTCTAC 451665 | |||| | || | | | | ||||| | || | | | |||||| | Sbjct 12271 AGAGTTGTTAGACATTTCATCAAAG-TTTTCAAGAAGAAGCATGGAATTGATATTAGTGA 12329 Query 451666 TAACCAAAAAGCACTTAGACGTCTTAAA-ACATCAGCAGAAAAAGCTAAAATTACACTCA 451724 ||| ||||||| |||| ||||| | | | || ||||| || | ||||| Sbjct 12330 CAACTCAAAAGCA-TTAGCAAAATTAAAGAGAGAGGTTGAGAAAGCGAAGAGAACACT-- 12386 Query 451725 GTTCAACACAAA---CTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATG 451781 || | |||| | ||| | ||| | ||||| ||| || || ||||| |||| | Sbjct 12387 -GTCCTCTCAAATGTCGACTCGCATAGAGATTGACTCTTTCGTGGACGGAATTGATTTTT 12445 Query 451782 CTACTACTCTTACCCGTGCTAAATTTGA----------ATCAATTTGTTCCAGTATTTTT 451831 | |||| | | || || ||||| || |||||||| | | || Sbjct 12446 CAGAATCTCTATCAAGAGCAAAGTTTGAGGAGCTGAATATGGATTTGTTCAAAAAAACTT 12505 Query 451832 GCACGGGTAATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAA 451891 ||||||| || | || || | |||| ||||||| | |||| || Sbjct 12506 ----------TGAAACCAGTGCAGCAGGTTCTTGATGACGCTAAAATGAAGCCAGATGAA 12555 Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 || ||||| | || | || || || ||||| |||||||| ||| ||||||| | | Sbjct 12556 ATAGATGATGTGGTTTTCGTCGGTGGATCTACTCGAATTCCAAAAGTTCAAGAGTTAATC 12615 Query 451952 TCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 || || |||||| | | | ||| || | ||||| || || ||||| || Sbjct 12616 GAGAATTTCTTCAATGGAAAAAAGATTTCTAAAGGCATCAATCCAGACGAGGCTGTGGCG 12675 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGAT 452071 | |||||||| ||||| | || | | || ||||| || || | | | ||| Sbjct 12676 TTCGGTGCTGCTGTTCAGGGAGGTGTGCT------TTCAGGCGAGGAGGGAGTTGAAGAC 12729 Query 452072 ATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATG 452131 || |||| | ||||| | || || ||||||| |||| || | || || | ||| Sbjct 12730 ATAGTGTTGATCGATGTCAACCCACTCACTCTTGGTATTGAGACTTCCGGAGGTGTCATG 12789 Query 452132 ACTAATTTAATTAAACGAGGA--ACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTA 452189 || | || || ||| |||| ||| |||||||| ||||| || | |||| | Sbjct 12790 ACCACATTGATCAAA--AGGAACACTCCTATTCCTACACAAAAGTCCCAGATATTTTCCA 12847 Query 452190 CAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGA 452249 | || ||||||||| || | ||| || ||||| | |||||| ||| | || ||| Sbjct 12848 CTGCCGCTGATAACCAGCCGGTTGTCTTGATCCAAGTCTATGAAGGTGAAAGAGCGATGG 12907 Query 452250 CACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGG 452309 | |||||||||| ||||| | ||| | || || || ||| |||||| | Sbjct 12908 CCAAAGATAATAATCTGTTAGGAAAGTTTGAGTTAACAGGTATACCACCTGCGCCAAGAG 12967 Query 452310 GAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTG 452369 | |||||||| || | || | | | |||| | || |||||| | || || || Sbjct 12968 GCGTCCCTCAAATCGAGGTCACGTTTACTCTTGACTCTAACGGTATTTTGAAAGTTTCTG 13027 Query 452370 CAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTT 452429 | ||| ||| | | ||||| || | || |||||||| |||||||| || Sbjct 13028 CTACTGATAAAGGAACAGGAAAGTCCAATTCTATAACAATTACCAATGATAAGGGTCGCC 13087 Query 452430 TATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATT 452475 | || || || || || ||||| | | || |||||||| || || Sbjct 13088 TTTCGAAGGAGGAAATCGAAAAGAAAATCGAGGAAGCAGAGAAGTT 13133 >seq55 Length=154688 Score = 149 bits (164), Expect = 2e-30 Identities = 284/416 (68%), Gaps = 3/416 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | ||||| || | | || ||||| || || || |||| || ||| Sbjct 63322 GGCAAGCCTCACATTCAGGTCGAGTTCAAGGGTGAGACCAAGGTGTTCACTCCAGAGGAA 63263 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||||| || || || ||||||||||||||||| || || ||| | Sbjct 63262 ATCTCGTCGATGGTGCTGACCAAGATGAAAGAAACAGCAGAGTCGTACATGGGTGGCAAA 63203 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || ||||| || || || ||||| || || || ||||| || | ||| | |||||||| Sbjct 63202 GTGACTGACGCCGTCATCACTGTCCCTGCCTACTTCAACGACTCGCAAAGACAAGCAACC 63143 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | ||||| ||||| ||||| || |||| || || || || || || Sbjct 63142 AAGGATGCCGGTCTGATTGCCGGTTTGAATGTGCTCAGAATCATCAACGAGCCAACCGCC 63083 Query 451433 GCTGCTCTAGCATATGGACT--AGGAAAATCA-AAAGAAACAGAAGaaaaaaaTATTTTA 451489 ||||| | || || || || | | || | ||| | || ||| |||||||||| Sbjct 63082 GCTGCCATCGCCTACGGTCTTGATAAGAAGGAGCAAGGTAAAGGCGAACAAAATATTTTG 63023 Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA 451549 | || ||| ||||||| || || ||| |||| | | || ||||| || || | Sbjct 63022 ATTTTCGATCTTGGTGGTGGTACCTTCGATGTTTCTTTGTTGTCCATTGACGAGGGTATC 62963 Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| || ||||| || |||||||| || | || ||||| || | ||||| Sbjct 62962 TTTGAGGTTAAGGCTACGGCCGGTGATACCCACTTGGGTGGTGAGGACTTCGATAA 62907 >seq23 Length=343512 Score = 141 bits (156), Expect = 4e-28 Identities = 260/378 (69%), Gaps = 5/378 (1%) Strand=Plus/Plus Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279 || ||||| || || ||| |||| |||||||| || |||||||| | || || ||| Sbjct 49442 AAGGGTGAGACCAAGGTGTTTACTCCAGAAGAAATCTCGTCTATGGTGTTGACCAAGATG 49501 Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339 || || || || || | | || | | |||| || || || ||||||||||| Sbjct 49502 AAGGAGACCGCCGAGTCTTTCCTCGGAACCACCGTTAAGGACGCTGTTATTACTGTTCCA 49561 Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 ||||| ||||| ||| | ||| | ||||| || || ||||| || ||||||||| | Sbjct 49562 GCTTACTTCAACGATTCCCAAAGACAAGCCACCAAGGATGCCGGTTTGATTGCTGGTCTT 49621 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 ||||| | |||| ||||| || ||||| || || ||| | || || || || ||| | Sbjct 49622 AATGTCATGAGAATCATTAACGAGCCTACTGCTGCCGCTATTGCCTACGGTCT-GGACA- 49679 Query 451460 TCAAAAGAAACA-GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518 | |||| || | ||| | || |||| | || ||| ||||||||||||| || Sbjct 49680 --AGAAGAGCCAGGGTGAACAGAACGTTTTGATTTTCGATCTTGGTGGAGGAACCTTCGA 49737 Query 451519 TACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATAC 451578 | ||| | || || ||||| || || | || || || ||||| || |||||||| Sbjct 49738 TGTTTCGCTTCTGTCCATTGAGGACGGTATTTTCGAGGTCAAGGCTACTGCCGGTGATAC 49797 Query 451579 TCATCTAGGAGGTGAAGA 451596 || | ||||||||||| Sbjct 49798 CCACTTGGGAGGTGAAGA 49815 >seq61 Length=567400 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| ||||||| || || || || ||||| ||||| || ||| Sbjct 444693 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 444634 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || |||||||| |||||||||||||| || ||||| || Sbjct 444633 GACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAG 444574 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | ||||| | || || || || ||||| || |||||| || | ||||| || Sbjct 444573 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 444514 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || ||||| || || || ||||||||||| Sbjct 444513 ATTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGG 444470 Score = 134 bits (148), Expect = 5e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| |||| || || || || || ||||| ||||| || ||| Sbjct 445377 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445318 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||||||||||||||||||||||| |||||||| || Sbjct 445317 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445258 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | ||||| | || || || || ||||| || |||||| || | ||||| || Sbjct 445257 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445198 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || | ||| | || || ||| ||||||| Sbjct 445197 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGG 445154 Score = 131 bits (144), Expect = 7e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || |||| || |||||||| ||| | || || ||||| || Sbjct 445606 AATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTC 445547 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | ||| || |||||||||||||||||||| |||||||| || Sbjct 445546 TGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCA 445487 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | ||||| | || || || || ||||| || |||||| || | ||||| || Sbjct 445486 GCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAA 445427 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | ||||| || | ||| ||||||| Sbjct 445426 CATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGAGG 445382 Score = 129 bits (142), Expect = 2e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| |||| || || || || || ||||| ||||| || ||| Sbjct 444921 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 444862 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||||||||||||||||||||||| || ||||| || Sbjct 444861 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 444802 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | |||||| | || || ||||| ||||| || ||||| || | || ||||| Sbjct 444801 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 444742 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || | || | || || ||| ||||||| Sbjct 444741 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGG 444698 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| |||| || || || || || ||||| ||||| || ||| Sbjct 445149 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445090 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| |||||||| ||||| || || || || ||||||||| Sbjct 445089 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445030 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || |||||| | || || ||||| ||||| || |||||| || | ||||| || Sbjct 445029 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAAC 444970 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | ||| | || | ||| ||||||| Sbjct 444969 ATTCAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGAGG 444926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975716729283128