Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq65 215 6e-51 seq45 96.9 4e-15 >seq65 Length=94251 Score = 215 bits (238), Expect = 6e-51 Identities = 1117/1758 (64%), Gaps = 47/1758 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || || ||||||||||| || || ||| || Sbjct 83526 CCCCAGCACATGGTCATGCGTGTGGCCATTGGTATCCATGGCGATGACATTCCCAGCGTC 83585 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || |||||| | | |||| |||||| | ||||| || || Sbjct 83586 ATCGAGACGTACAACCTGATGTCGCAAAAATTCTTCACCCACGCGTCGCCAACTCTGTTT 83645 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || || ||||| || || || ||||| |||||| | |||| | ||||| || Sbjct 83646 AATGCCGGTACTCCTCATCCGCAGATGTCTTCCTGTTTCTTGGTTGCCATGAAGGACGAC 83705 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || ||| | ||||| || | ||| |||| ||||| | ||||| ||| ||||| Sbjct 83706 TCCATCGACGGCATCTATGACACCCTCAAGACCTGTGCTCTGATCTCCAAGGCTGCTGGA 83765 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911 || || || ||||||| || | | ||| ||| | |||| || || || || Sbjct 83766 GGCATTGGTCTGCACATTCACAACATTAGATCCACCGGGTCTTACATCGCTGGAACCAAC 83825 Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971 || || | || || ||||||||| | | || || ||| ||| || | || || Sbjct 83826 GGCACGTCCAACGGCATCATTCCAATGGTGAGAGTGTTCAACAACACCGCCAGATACGTC 83885 Query 111972 AACCAAGCTGGGCGTCG-CAAGGGATCTATCGCAGTCTATCT------TGAGCCATGGCA 112024 |||| ||| | | |||| | || ||| | ||| |||||||||||| Sbjct 83886 GACCA----GGGAGGCAACAAGCGGCCTGGCGCGTTTGCTCTGTACGTTGAGCCATGGCA 83941 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 | ||||||| | || || | || | || ||||| ||| | ||||| | | | | Sbjct 83942 CTCGGATATTTTTGACTTTATCGACATCCGGAAGAACCATGGTAAGGAGGA-GATCAGAG 84000 Query 112085 CC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 || | || || ||| | || || ||||||||||| || |||||| ||||||| ||| ||| Sbjct 84001 CCAGAGACCTGTTCCCTGCGCTGTGGATTCCAGACCTGTTCATGGAGAGAGTCGAGCAGA 84060 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG---G 112200 | | ||| | || || | || | |||| || || || ||||| |||| | Sbjct 84061 ACGCTGAGTGGACGCTGTTCTCGCCTTCCGAGGCTCCAGGGCTTTCCGA---CGTGTACG 84117 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC-GACG 112259 | || ||||| | | |||||||| | ||||| ||| ||| | | ||| | |||| Sbjct 84118 GCGACGAGTTCAAGGAGCTCTACACCAGATACGA-AAAGGAAGGCCGTGGACGCCAGACG 84176 Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 || | || | || | ||||| | || ||| | || | || || || || || || || Sbjct 84177 GT-CAAGGCACAGAAGCTGTGGTACGCCATTTTGGAGGCCCAGACGGAAACAGGCACGCC 84235 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 || ||||| ||||| |||||||| ||| |||| || || ||||| | ||| | || Sbjct 84236 ATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAGAACCTTGGTATCAT 84295 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438 |||| || || | || ||||| | || | || ||| ||| ||| || Sbjct 84296 CAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCAGAGGAGGTGGCCGT 84355 Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTG 112497 |||||| | || || ||||| || || | || || ||| ||||| || || Sbjct 84356 GTGTAATTTGGCGTCGATCGCCCTTCCAGCCTTCGTTGAGTCCGACGACAATACCAGCTG 84415 Query 112498 -----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552 | | ||||| || ||| | | || || |||||| || ||||| |||| | Sbjct 84416 GTACAACTTCGAAAAGCTGCACCAGATCACCAAGGTTGTCACTAAGAACCTCAACAAGAT 84475 Query 112553 TATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 || || ||||| | ||| || ||| ||| || | | ||| || ||| | || | | Sbjct 84476 CATCGACAGAAACTATTATCCTGTTCCAGA-GGCAAGAACATCCAACATGCGCAACAGGC 84534 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 112671 | |||| | |||||||| || || || || || ||||| | | | | |||| Sbjct 84535 CGATTGCCGTGGGTGTCCAGGGCCTGGCCGACGTGTTCATGCAGCTGAGACTGCCTTTTG 84594 Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731 | || || || | || | || | || || ||||| || || |||| ||| Sbjct 84595 ACTCACCAGAGGCCAGAGAGCTGAACATCCAGATTTTCGAGACCATCTACCACGGGGCTT 84654 Query 112732 TTGAGGCGAGTTCGGAGTTGGCAG--AGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 | ||||| | | ||| |||| | ||| ||||| ||| || ||||||||||| || Sbjct 84655 TGGAGGCCTCTGCCGAGCTGGCCGTTAGG--GATGGCAAATACGAGACCTTTGAGGGATC 84712 Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGA--TATGTGGGAAGGTGAGACCAAGC-TTCA 112846 || || || || || | | || || || | || || || || |||| | || Sbjct 84713 GCCGGCGTCGCAGGGTATTTTGCAGTTCGACCTTTGGGGCAA---GAAGCCAACCGATCT 84769 Query 112847 CTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 112906 | ||||||||| | ||||||| || ||| || || | || || | || || || Sbjct 84770 GTGGGACTGGGACTCGCTCAAGGCCCGTATCCAGAAGGATGGACTCAGAAATTCGCTCTT 84829 Query 112907 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 112966 | |||| || |||||||| || || || | || || ||||| |||| || || || || Sbjct 84830 GGTGGCTCCTATGCCAACCGCGTCGACATCGCAGATTTTGGGATATAACGAGTGTTTCGA 84889 Query 112967 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026 || ||||| | |||||||| |||||| || || || ||||| ||| ||||| Sbjct 84890 GCCTTACACCTCCAACATCTACTCCAGAAGAGTTCTTGCTGGTGAGTTCCAGATCGTCAA 84949 Query 113027 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 113086 | | | | || ||||| | |||| | ||| | | |||||| || | Sbjct 84950 CCCGTACTTGCTGAGGGACCTTGTTAACCTTGGATTGTGGAACGACTCGATGAAGAATTT 85009 Query 113087 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAA 113146 ||| | || | || || || || || | || | ||| | || | ||| | Sbjct 85010 CATCATCAAGGACAACGGCTCGATCCAGAACTTGCCAAATGTGCCACAGGAGTTGAAGGA 85069 Query 113147 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 113206 |||||||||| || ||||| || | ||| | || |||||||| || || | Sbjct 85070 CCTGTACCGCACCGTCTGGGAGATTCCGCAGAAAAGCATTATCGACATGGCGGCCGACAG 85129 Query 113207 TGGTCGC-TTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGAT 113263 || ||| | ||| || | |||| ||| |||||| | | | | | ||||| || Sbjct 85130 AGG-CGCGTACATCGACC--AGTCGCAGTCGATGAATATCCACCTCAAGAACCCAACCAT 85186 Query 113264 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 113323 | |||| | | || |||||| | || | |||||||| || ||||| || || ||||| Sbjct 85187 GGGCAAGTTGACGTCGATGCACTTCTATGGCTGGAAGAAAGGACTCAAGACCGGCATGTA 85246 Query 113324 TTACCTCCGATCTAAGGC 113341 |||||| || | |||| Sbjct 85247 CTACCTCAGAACCCAGGC 85264 >seq45 Length=88998 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 ||||| ||| ||||| | || ||||| || |||||||| ||||||||||| || || Sbjct 65280 TTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTT 65221 Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293 | | || | |||||||||||| |||| || ||||| ||||| |||||| |||||| Sbjct 65220 GCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTTCTCGAACGAG 65161 Query 102294 CTTATCTCTCGTGACGAGGGACTCCA 102319 | |||| | |||||||| || || Sbjct 65160 TTGATCTGCAGAGACGAGGGTCTGCA 65135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741887887520