Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq64 107 2e-18 >seq64 Length=816055 Score = 107 bits (118), Expect = 2e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATA-T 154929 ||||||||| ||||||||||| ||| ||||| | || || ||| || || ||| | Sbjct 558255 TATTATGATCACATACCCATCGACATATGGTATGTTCGAGCCTACAATCAGG--GATGCT 558198 Query 154930 GTAAGA-TCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCA 154988 || | ||||||||| |||| || ||||| ||||||||||| || || | ||||| Sbjct 558197 GTCCGGCTCGTTCATGCTCATGGAGGCCAGGTTTATCTTGATGGCGCGAACATGAATGCT 558138 Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACAT 155048 || || ||| | || || | || | || || || || |||||| | || || ||| Sbjct 558137 CAAGTGGGATTGACATCCCCGGGAGACTTGGGAGCCGACGTCTGTCATTTGAATTTGCAT 558078 Query 155049 AAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCA 155108 || || ||| ||| || ||||| || || ||||| || || || ||||| |||| ||| Sbjct 558077 AAGACTTTCGCTATACCTCATGGTGGGGGTGGTCCAGGTGTTGGACCTATTTGTGTTGCA 558018 Score = 104 bits (114), Expect = 3e-17 Identities = 180/260 (69%), Gaps = 4/260 (2%) Strand=Plus/Minus Query 153767 GCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAAC 153826 |||||| ||||| |||||||||| | |||||| |||||||| ||||| ||||| || Sbjct 559377 GCAAAGATTTGGCGTTCCTATGGGTTTTGGAGGCCCTCATGCGGCATTTTTTGCTGTCAC 559318 Query 153827 AGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGTGAA 153884 || || | | || ||||| || || ||| | || || ||| || ||| || Sbjct 559317 TGAAAAATTGCAAAGGAAGATTCCAGGAAGACTAGTGGGCGTCA--CAAAAGACAGGCTC 559260 Query 153885 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAA 153944 |||||| | || | || ||||| || ||| | |||||||| |||| ||||| || Sbjct 559259 GGTAATCATGCCCTTCGTTTGGCACTTCAAACTCGTGAGCAGCACATCAAAAGAGAAAAG 559200 Query 153945 GCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCA 154004 || || ||||||||||| |||||||| || || || || || | | ||| | Sbjct 559199 GCTACTTCAAACATCTGCACTGCTCAGGCTCTACTCGCCAACATTGCAGCCAACTACGTG 559140 Query 154005 GCATATCATGGTGCAGATGG 154024 | ||||||||| | ||||| Sbjct 559139 GTTTATCATGGTTCCGATGG 559120 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 153243 GTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAA 153302 || || ||||| || | ||||| || || |||||||||||| |||||||| ||||| Sbjct 559907 GTGATCCAGCGGAATCTGCTTGAAAACCCCGCTTGGTACACATCCTACACTCCTTATCAG 559848 Query 153303 GCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAA 153362 | ||| | || || ||| | | || | | || ||||| || || | | | || Sbjct 559847 CCCGAGGTTTCGCAAGGACGGCTCGAGAGTCTTTTAAATTATCAGACCATTGTTTCGGAC 559788 Query 153363 CTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAA 153422 || || ||| | ||| | |||||| ||||||| | ||||| || |||||||| || ||| Sbjct 559787 CTCACTGGACTTCCAGTGGCAAACTCATCTCTTCTTGATGAGGCTACTGCAGCTGCGGAA 559728 Query 153423 GCAATG 153428 || ||| Sbjct 559727 GCCATG 559722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212322149440