Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq61 188 2e-42
seq64 179 8e-40
seq23 163 6e-35
>seq61
Length=567400
Score = 188 bits (208), Expect = 2e-42
Identities = 175/222 (79%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| ||||| | || ||||| |||||||| |||||||||| |||||
Sbjct 445156 TCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGT 445215
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || || || |||| ||| ||||| ||||| || ||
Sbjct 445216 TCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCC 445275
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||||||||| |||||| || || || ||||| || || || |||||
Sbjct 445276 TTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAG 445335
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | |||||||| ||||| ||||| ||||| | ||||||
Sbjct 445336 GGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||||||||| | |||||||| || || || ||||| |||||||||| |||||
Sbjct 444472 TCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGT 444531
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || || || |||| ||| ||||| || || || ||
Sbjct 444532 TCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCC 444591
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || || |||||||| ||||||||| || || ||||| || || || |||||
Sbjct 444592 TTCCTTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAG 444651
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | |||||||| ||||| ||||| ||||| | ||||||
Sbjct 444652 GGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 444693
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| || || | || ||||| |||||||| || || |||| | ||
Sbjct 444700 TCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGATAACGT 444759
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || |||||||| |||||||| ||||| ||||||| ||| ||||| || || || ||
Sbjct 444760 TCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCC 444819
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||||||||| |||||| || || || ||||| || || || |||||
Sbjct 444820 TTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAG 444879
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | |||||||| ||||| ||||| ||||| | ||||||
Sbjct 444880 GGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 444921
Score = 152 bits (168), Expect = 1e-31
Identities = 168/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||| || | ||| | || |||||||| ||||| |||||||||| |||||
Sbjct 445384 TCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGT 445443
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || || || |||| ||| ||||| ||||| || ||
Sbjct 445444 TCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCC 445503
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || |||||||| || ||||| || || || ||||| ||| ||| || || |
Sbjct 445504 TTCCTTATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAA 445563
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| | || || || |||||||| || ||||| | |||||||
Sbjct 445564 AGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTT 445607
>seq64
Length=816055
Score = 179 bits (198), Expect = 8e-40
Identities = 174/224 (78%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||||| ||| | || | ||||||||||||||| || ||||| || | ||| ||
Sbjct 728719 TCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGT 728660
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || || ||||| |||||||| |||||||| | || ||| ||||| ||||| || ||
Sbjct 728659 TCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCC 728600
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| || || ||||||||| || |||||||| ||| || || || |
Sbjct 728599 TTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAA 728540
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
||| | |||||||| ||||| || || ||||| | |||||||
Sbjct 728539 GGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTT 728496
>seq23
Length=343512
Score = 163 bits (180), Expect = 6e-35
Identities = 170/223 (76%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||| | || ||||| | ||||||||| || || || ||||| || | ||||||
Sbjct 313245 TCTCAGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGT 313186
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || || |||||||||||||| ||||| || |||| ||| ||||| || || || ||
Sbjct 313185 TCTGCCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCC 313126
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||| || |||||||| ||| ||||| || ||
Sbjct 313125 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAG 313066
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||| | ||||| || |||| || || ||||| | |||||||
Sbjct 313065 GGTGATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCATT 313023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480661794622
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |