Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq65 279 1e-69 seq45 250 5e-61 >seq65 Length=94251 Score = 279 bits (308), Expect = 1e-69 Identities = 1045/1614 (65%), Gaps = 61/1614 (4%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| |||||||| ||||| | || || || || ||| | ||| || ||||| Sbjct 84952 GGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAA 84893 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| | |||||| | |||| |||||| | || || || ||||| |||||| Sbjct 84892 GGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCC 84833 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 |||| ||| || || | ||| | || ||| || | ||| |||||||| Sbjct 84832 ACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCC 84773 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || |||| ||| | | |||| | ||| | ||| |||||||| || || | Sbjct 84772 CA-----CAGATCGGT--TGG--CTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGC 84722 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 | | || |||| | | ||| ||||| | |||||||||| || Sbjct 84721 GACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGAG 84662 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 |||| || || ||| ||||||||| || || |||| |||| |||| |||||||| Sbjct 84661 GCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCT 84602 Query 213267 GGGGACGTGAAGGGCATCATCA--TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 || || || |||| ||| ||| | |||||| || ||||| |||||||| || | Sbjct 84601 GGTGAGTCAAAAGGCAGTCTCAGCTGCAT--GAACACGTCGGCCAGGCCCTGGACACCCA 84544 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGAC-TTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 | | || || |||| | || ||| || || || ||| | || ||| |||| Sbjct 84543 CGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGC-CTCTGGAACAGGATAATAGTTT 84485 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 | ||||||||||||||||||||| ||| | || ||||||| ||| ||| | ||| Sbjct 84484 CTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCG 84425 Query 213444 TGATTGAACACG------TAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497 ||| || | | | | || || || || | || |||||||| ||| Sbjct 84424 AAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCGATCGACGCC 84365 Query 213498 AGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 | || || ||||||||||||| |||| || |||||| | || ||| ||||| Sbjct 84364 AAATTACACACGGCCACCTCCTCTGGAGA---TGAGTACTCGACAATTTCGCAGCACAAA 84308 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614 || | |||| | || ||||||| ||||| | ||| | |||| | |||||| Sbjct 84307 TTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTG 84248 Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674 || |||||| | || | || || || ||||| | ||| || | ||| || | | Sbjct 84247 TACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTC 84188 Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTA-CTGTTCGTAGAG 213730 ||||||||| | ||| | | ||| | | ||| |||| ||| | |||||| Sbjct 84187 TGTGCCTTGACC----GTCTGGCGTCCACGGCCTT--CCTTTTCGTATCTGGT-GTAGAG 84135 Query 213731 CTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA----CAGGATGCGGGACACA 213786 ||| ||||| |||| ||| | || | || || ||| | | | ||| || ||| Sbjct 84134 CTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGA-ACA 84076 Query 213787 TGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGC 213845 | |||| || ||| | ||| |||||||| |||||||||||| || | ||||||| Sbjct 84075 ---GCGTCCACTCAGCGTTCTGCTC-GACTCTCTCCATGAACAGGTCTGGAATCCACAGC 84020 Query 213846 GCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGA 213905 || | ||||||||| |||| || |||| ||| ||| ||| || || | || | | Sbjct 84019 GCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATA 83960 Query 213906 AAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TC 213962 |||||||| || |||| |||||| ||||| | ||| | ||||| ||||| |||| | Sbjct 83959 AAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTG 83900 Query 213963 TTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGC 214022 ||||| |||||||| || ||||| ||||||| | | || | || | | Sbjct 83899 TTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATG 83840 Query 214023 CCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATG 214082 ||||||||| ||||||||||| || || || || |||| || || | |||| ||| Sbjct 83839 CCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATG 83780 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 || || ||||| || || ||||||||||| || ||| | | | || || | Sbjct 83779 TGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAG 83720 Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202 |||||| | ||| ||| || | | | | |||||| ||| || | ||| || Sbjct 83719 ATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG--AT 83662 Query 214203 GACGAG--CCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGA 214260 || ||| || | || || || || || || ||| | | || || | || | | Sbjct 83661 GAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCA 83602 Query 214261 GCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC-CTC 214319 | |||| ||||| | ||| ||| ||||| | ||||| | || ||| | | Sbjct 83601 GGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGC-CACACGC 83543 Query 214320 ATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGTAGGAGC 214377 || | |||||||||||| ||||| | | | ||| | ||| | || || || | Sbjct 83542 ATGACCATGTGCTGGGG--TCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACC 83485 Query 214378 GCTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAG 214437 ||||||| |||||||| ||||| ||| ||| | | || | ||| | | ||||| Sbjct 83484 GCTCCAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAG 83425 Query 214438 CGTCCAGCTCTTCCGCGTGCTCTTGGCTCAGCTTGAAAATCTCGTCCGAGATCA 214491 || |||||| || |||||||| ||| | | | | | ||||||||||||| Sbjct 83424 AGTTCAGCTCGTCGGCGTGCTCCTGGACAATCCGGTACGTTTCGTCCGAGATCA 83371 >seq45 Length=88998 Score = 250 bits (276), Expect = 5e-61 Identities = 577/855 (67%), Gaps = 36/855 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| ||||| |||||||| ||||| || | | ||||||||||| Sbjct 64831 CTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAGAGAGATGTTCTC 64890 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||| ||||| | | ||| || | | || ||| |||| | ||| Sbjct 64891 CATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTG-CAG-CCCAGAGATAAAAGC 64948 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || | || || || |||| | ||| | |||| ||| || |||||| || | ||| Sbjct 64949 AGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAGG 65008 Query 48017 GACACGGGCAAAGCCTTTGTGA-GAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 || |||| || | |||| | | ||| || || |||| ||||| || | || Sbjct 65009 TTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCTCGGTGATGAT 65067 Query 48076 CTGCTTAACGCGG-GACTCTGA---GGGT-TTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130 || | | | || | | ||| |||| |||||| |||||| | |||||| Sbjct 65068 CT--TGAGCACGATGTCGCTGTTTGGGGTGTTGTTG---AGGTGCGAGA---AGAGCAGA 65119 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| | |||| || ||||| | || ||| | | |||| |||||| ||| Sbjct 65120 CAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGA 65179 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || |||| ||||||||||| || | || || |||||||||||||| Sbjct 65180 CCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAA 65239 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || |||||||| || || ||||| ||| ||||| | || || | || ||| | Sbjct 65240 ATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTCGTTG 65299 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | ||||| || ||||||| |||||| ||||| || ||||| ||||| | Sbjct 65300 ATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTG 65359 Query 48371 AAGAGCTTCTTGCACTCACCT------GCGTCCGCAACATAGGTAGTGAGCAGCTTTGCG 48424 || || | ||||| || | |||| || ||||| || ||| | | Sbjct 65360 AAAAG------GAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAG 65413 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||| | || ||||| | ||||| || |||||||||||||||||| | |||||||| Sbjct 65414 TACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCA 65473 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || ||||| || | ||||| |||| | || ||||| ||||| || || || ||| Sbjct 65474 GGAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAA 65533 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAA-TGGCGCTCGTTGTGGGTGAG---AGC 48600 |||||||||||||| | || | | || ||| | | |||||||| | |||| Sbjct 65534 GCAGCAAAGAAGGCCAACAC-TCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTT 65592 Query 48601 ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660 |||||| | || | ||| ||| ||| || | ||| || | |||||||| || || Sbjct 65593 GTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTC 65652 Query 48661 TGCTTTTTTGTACAT 48675 ||| || |||||||| Sbjct 65653 TGCCTTCTTGTACAT 65667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532031485440