Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq45 264 2e-65 seq65 235 1e-56 seq52 98.7 2e-15 >seq45 Length=88998 Score = 264 bits (292), Expect = 2e-65 Identities = 592/874 (68%), Gaps = 52/874 (6%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | ||| ||||||||| || || || ||| Sbjct 65679 GAGATTTGGCAGATGTACAAGAAGGCAGAGGCCTCGTTCTGGACCGCAGAGGAAATCGAT 65620 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAG-----CATTTTC 25588 ||| |||||||| || ||| |||| || | ||| ||| | || | || | Sbjct 65619 CTGTCCAAGGACCTGCACGACTGGAACAACAGACTCAACGACAACGAGAGATACTTTGTT 65560 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 || || |||||||| |||||||| || || || || || || |||||||| || || Sbjct 65559 TCGAGA--GTGTTGGCCTTCTTTGCTGCTTCGGACGGCATTGTCAACGAGAACTTGGTCG 65502 Query 25649 AGAGATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707 ||| ||| | || ||||| || | || ||||||||||||||||||| |||||||| Sbjct 65501 AGAACTTCTCTGCCGAGGTGCAAGTTCCTG-AGGCCAAGTGTTTCTACGGGTTCCAGATC 65443 Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACA 25764 || || || | ||||| || ||| | ||||||||| || ||| | | Sbjct 65442 ATGATGGAGAACATCCACTCGGAAACGTACTC---GCTTCTGATCGACACCTACGTCAAG 65386 Query 25765 GACGTCGCCGA--GA----GAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATC 25818 ||| || | || ||| || || || ||||| ||| ||| || | ||| Sbjct 65385 GAC----CCTAAGGAAGCTGAGTTC--CTTTTCAACGCCATTGAGACCATCCCATGTATC 65332 Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAG--AGCGCTACGTTTGGCG 25876 ||| |||||| |||||||||| ||||||||| | || ||| || ||||| || Sbjct 65331 AAGGAGAAGGCCGAATGGGCCATGAGATGGATCAACGACGAGGAAGCCCT--GTTTGCCG 65274 Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 || | || || || |||||||| |||||||| || || ||| || |||||||| | | Sbjct 65273 AGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTGCCTCGA 65214 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCATC 25995 |||||||||||||| ||| | |||| ||||| || ||| ||| || |||||| | ||| Sbjct 65213 TCTTCTGGCTCAAGAAGA-GAGGACTGATGCCTGGTCTGACCTTCTCGAACGAGTTGATC 65155 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 |||| ||||||||||| || | || |||||||| ||||||| | || ||| ||| Sbjct 65154 TGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTTCTCG---CAC---CTC 65101 Query 26056 CACAA-ACCTTCTCAAGAGAC--CGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAG 26112 |||| ||| || ||| ||| || ||||||| ||||| || |||||||| Sbjct 65100 AACAACACCCCAAACAGCGACATCGTGCTCAAGATCATCACCGAGGCCGTCGAGATCGA- 65042 Query 26113 AAGGAGTTTC-NNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171 || ||| | | |||| |||||| || || || Sbjct 65041 AAAGAGATACTTCACCGACGCCCTGCCTGTCAACCTGCTGGGTATGAACTGCAACCTGAT 64982 Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGA-- 26229 | |||| ||| | |||| ||| || |||| ||||| | ||||| || || ||| Sbjct 64981 GTGCCAGTACGTGGAGTTTGTTGCTGACCGGCTGCTTTTATCTCTGGG-CT-GCAAGAAG 64924 Query 26230 CTCTACAGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGA 26287 | ||||| |||| | |||||||||||||| ||||| ||||| || | | ||| |||| Sbjct 64923 CACTACA--ACGCCACAAACCCGTTCGACTTCATGGAGAACATCTCTCTTGCAGGCAAGA 64866 Query 26288 CCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||||||| || ||||| ||| ||| || || Sbjct 64865 CCAACTTCTTCGAGAAGAGAGTCTCCGATTACCA 64832 >seq65 Length=94251 Score = 235 bits (260), Expect = 1e-56 Identities = 820/1257 (65%), Gaps = 37/1257 (3%) Strand=Plus/Minus Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGGAGAAGTGAAG 221485 |||||||||||||||| || ||| |||| || |||| ||||||| || || || Sbjct 84648 CGTGGTAGATGGTCTCGAAAATCTGGATGTTCAG-CTCTCTGGCCTCTGGTGAGTCAAAA 84590 Query 221486 GGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTG 221545 |||| | |||| | || ||||||||||| ||||| || || | | || |||||| Sbjct 84589 GGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGGCAATCGGCCTG 84530 Query 221546 TGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTG 221605 | | | ||||||| | || ||||| || |||||| |||| |||||| | ||| Sbjct 84529 TTGCGCATGTTGGATGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGTCGATGATCTTG 84470 Query 221606 TTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAAC 221665 ||||||||| ||||| || || | || | |||||| | | ||| || || | Sbjct 84469 TTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGTTGTAC--CAGC 84412 Query 221666 TCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725 | | ||||| | | || || || || ||||| | |||| |||||| Sbjct 84411 TGGTATT-GTCGTCG---GACTCAACGAAGGCTGGAAGGGCGATCGACGCCAAATTACAC 84356 Query 221726 ACGGCCACCTCGTCCTTGTTGGTA--TACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783 ||||||||||| || || | | |||| | || || || | || ||| Sbjct 84355 ACGGCCACCTCCTC--TGGAGATGAGTACTCGACAATTTCGCAGCACAAATTAGACGACT 84298 Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAG-CGTCCTTGTAGAGCATA 221842 ||||| | || |||| || || || | |||| || | |||| |||||||||| ||||| Sbjct 84297 TGATGATACCAAGGTTCTTCTGGTTGGTCTTG-GAGTTGCAGGCGTCCTTGTACAGCATG 84239 Query 221843 AAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCT 221901 || || ||| || ||| ||| ||| ||| ||| || ||| || | |||| || | Sbjct 84238 AATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCT-TCTGTGCCTT 84180 Query 221902 CACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTT 221961 |||||| | | | ||| | |||||| || | ||| |||||| | |||| Sbjct 84179 GACCGTC---TGGCGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTTGAACTC 84123 Query 221962 TTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTT 222021 || |||||| | ||| || |||||| | || || | | ||| |||| | Sbjct 84122 GTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCACTCAGC 84063 Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081 ||| | | ||| |||| |||||| ||||| || ||||||||||| | || || ||||| Sbjct 84062 GTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGGTCTCT 84003 Query 222082 GG-TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140 || || | | ||||||| || | ||| |||| | || | ||| |||||||| || | Sbjct 84002 GGCTCTGAT-CTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATATCCG 83944 Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200 |||||| ||||| | || | || | ||||| || ||||||||||| ||||| || | Sbjct 83943 AGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGGTCGA 83884 Query 222201 CCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGT 222260 | || | |||||| | | | | || | | |||||||| |||| Sbjct 83883 CGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTGCCGT 83824 Query 222261 TGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT---ACTG-GCAGACATGCCGATA 222316 |||| || ||||| | ||| || || | ||| | || ||||| || || Sbjct 83823 TGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA----CCAATG 83768 Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376 || || || || ||||||| || ||| ||||||| ||||| |||||| || || Sbjct 83767 CCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGATG 83708 Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCG 222436 ||||| ||||| | | | || ||||| || |||||||| | | | | || ||| Sbjct 83707 GAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACCGGCA 83648 Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCT 222496 |||||||| || || ||||| || ||| | |||||||| | ||||||||| Sbjct 83647 TTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGTCTCG 83588 Query 222497 ACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGG 222556 | ||| |||| |||| || || || || ||||| | |||| ||||| |||| Sbjct 83587 ATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTGCTGG 83528 Query 222557 GGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612 || ||||| | ||| || | | || | || || || || ||||| ||||| Sbjct 83527 GGTCTCTCGGC--GACTTTTCCATCAATCTTCA-AG-AGATATGACCGCTCCAGCGTCTT 83472 Query 222613 GAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC 222669 ||| ||||| |||||| ||||||||| ||| || | ||| | || |||||| Sbjct 83471 GAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTTCAGCTC 83415 >seq52 Length=883241 Score = 98.7 bits (108), Expect = 2e-15 Identities = 455/701 (65%), Gaps = 37/701 (5%) Strand=Plus/Minus Query 221767 ACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826 |||||| ||| |||||||||| |||| | | || |||||||| |||| || Sbjct 650442 ACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGC 650383 Query 221827 GTCCTTGTAGAGCAT-AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885 ||| |||||||||| |||||| | || || ||| ||||| || || ||| | || Sbjct 650382 GTCTTTGTAGAGCAGGAAAGGGGTC-CCTGTTTCCGTCTGAGAAACTAGTATCGCATGCC 650324 Query 221886 AGAGTTCTCTGG-CGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGT 221943 | |||| ||||| | |||| | | | | || |||||| |||||||| | | Sbjct 650323 ACAGTT-TCTGGGCTTTCACTTTACGGAT-ATAGCGACCCTCACG---TTCATACCTGTT 650269 Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACA-----CCTGGCG 221998 || ||| || |||| | || || || | || || || ||| | ||| | Sbjct 650268 GTAAAGCTTGACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCCTCG-- 650211 Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTT-GACCCTCTGCATGAAGAGGTCCGGGAT 222057 || | | || | ||| | |||| | | | | ||| ||| ||| || | || || || Sbjct 650210 -GAAAAA--AGGCACCACT-CTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTAT 650155 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 ||| || || | ||| | |||||| | || || ||| || | ||||||||||| Sbjct 650154 CCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAA 650095 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 |||| |||||||| | ||| || ||||||||||| | ||| | | | |||||| || Sbjct 650094 GTCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGG 650035 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCG 222236 || || || ||||| ||||||| | | || | | | || ||| |||| ||| | | Sbjct 650034 TCTTTTATTTCCACCTTGATCCA-CGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAG 649976 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | || |||||||||||| ||| || || || |||||| | ||| | || | | || Sbjct 649975 GCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGATGT 649916 Query 222297 TACTGGCAGAC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTG 222352 | || | || ||||| || || || || ||| || |||| |||| | |||| Sbjct 649915 T--TG--AAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA---CTTG 649863 Query 222353 AGAGT-GTCC--ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGAC 222409 || | || | | ||||| | ||||||||| | | | || |||||||| || Sbjct 649862 TGAATCGTTCTGAAAATGCCATTTATAGAGTCCCCATCCATTGCAAGAAGAAAACAGGAG 649803 Query 222410 GACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGG 222450 || | | || | || || |||||| |||||||| || Sbjct 649802 GATAAATTAGGCGTTTCGGTACCGGCGTTGAACAGCGTAGG 649762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844033703040