Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq52 132 2e-26 seq65 116 2e-21 >seq52 Length=883241 Score = 132 bits (146), Expect = 2e-26 Identities = 168/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974 || || ||| |||||||||||||| |||||||| ||||| | ||||||||||||||||| Sbjct 650190 ATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAAATAAATCTCT 650131 Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034 || | ||||||| ||||| || || || | | || | ||| ||||| | |||| Sbjct 650130 AGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAGTCCAGGAACTCAAACACGTCTGC 650071 Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094 ||||| || |||||||| || |||| ||| |||||| |||||||||||| || Sbjct 650070 ATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTTCCACCTTGATCCAC 650011 Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144 ||| |||| || || || |||| | ||| || || | ||| |||| Sbjct 650010 GTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCC-GTTG 649962 >seq65 Length=94251 Score = 116 bits (128), Expect = 2e-21 Identities = 215/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| ||||| || ||||| ||| ||||||| || | ||||||||||||| ||| || Sbjct 84071 CCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAA 84012 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | ||||| ||||| || || || || || || ||||| | || | || ||||| Sbjct 84011 CAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAA 83952 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 |||||| ||||||||||| || | || | |||||| || | || || || Sbjct 83951 AATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCC 83892 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 || || |||||||| || || | ||||| ||| ||| |||||||| | || | |||| Sbjct 83891 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAA-TGATGCCGTTGG 83833 Query 26146 AAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204 | | ||||| || | | || | || || || |||||||| | |||| || | || Sbjct 83832 ACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGAC 83773 Query 26205 CGATTCCACCAGC 26217 | || || ||||| Sbjct 83772 CAATGCCTCCAGC 83760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039796460950