Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq52 132 2e-26
seq65 116 2e-21
>seq52
Length=883241
Score = 132 bits (146), Expect = 2e-26
Identities = 168/230 (73%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974
|| || ||| |||||||||||||| |||||||| ||||| | |||||||||||||||||
Sbjct 650190 ATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAAATAAATCTCT 650131
Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034
|| | ||||||| ||||| || || || | | || | ||| ||||| | ||||
Sbjct 650130 AGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAGTCCAGGAACTCAAACACGTCTGC 650071
Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094
||||| || |||||||| || |||| ||| |||||| |||||||||||| ||
Sbjct 650070 ATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTTCCACCTTGATCCAC 650011
Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144
||| |||| || || || |||| | ||| || || | ||| ||||
Sbjct 650010 GTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCC-GTTG 649962
>seq65
Length=94251
Score = 116 bits (128), Expect = 2e-21
Identities = 215/313 (69%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| ||||| || ||||| ||| ||||||| || | ||||||||||||| ||| ||
Sbjct 84071 CCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAA 84012
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
| ||||| ||||| || || || || || || ||||| | || | || |||||
Sbjct 84011 CAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAA 83952
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085
|||||| ||||||||||| || | || | |||||| || | || || ||
Sbjct 83951 AATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCC 83892
Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145
|| || |||||||| || || | ||||| ||| ||| |||||||| | || | ||||
Sbjct 83891 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAA-TGATGCCGTTGG 83833
Query 26146 AAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204
| | ||||| || | | || | || || || |||||||| | |||| || | ||
Sbjct 83832 ACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGAC 83773
Query 26205 CGATTCCACCAGC 26217
| || || |||||
Sbjct 83772 CAATGCCTCCAGC 83760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039796460950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |