Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq64 98.7 1e-15 >seq64 Length=816055 Score = 98.7 bits (108), Expect = 1e-15 Identities = 179/260 (69%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 ||||| | ||||||||| | | ||| | | || || ||||| || || || || Sbjct 559120 CCATCGGAACCATGATAAACCACGTAGTTGGCTGCAATGTTGGCGAGTAGAGCCTGAGCA 559179 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 ||||||||||| || || || |||||| | || |||||||| | |||||| ||||| Sbjct 559180 GTGCAGATGTTTGAAGTAGCCTTTTCTCTTTTGATGTGCTGCTCACGAGTTTGAAGTGCC 559239 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGA--CCTACAATTCTGCCAGGTA 139440 || | ||| |||| || ||||| || ||| || || | ||| || || | Sbjct 559240 AAACGAAGGGCATGATTACCGAGCCTGTCTTTTG--TGACGCCCACTAGTCTTCCTGGAA 559297 Query 139441 TCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCA 139500 |||| || | | || || || ||||| ||||| |||||||| ||||| | |||| Sbjct 559298 TCTTCCTTTGCAATTTTTCAGTGACAGCAAAAAATGCCGCATGAGGGCCTCCAAAACCCA 559357 Query 139501 TAGGAATACCAAACCTTTGC 139520 |||||| ||||| |||||| Sbjct 559358 TAGGAACGCCAAATCTTTGC 559377 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || |||||||| || ||||| | ||||||| |||||| | ||| | ||| Sbjct 559722 CATGGCTTCCGCAGCTGCAGTAGCCTCATCAAGAAGAGATGAGTTTGCCACTGGAAGTCC 559781 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || | | | || || ||||| || | | || | | ||| || || | Sbjct 559782 AGTGAGGTCCGAAACAATGGTCTGATAATTTAAAAGACTCTCGAGCCGTCCTTGCGAAAC 559841 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 ||| | ||||| |||||||| |||||||||||| || || ||||| | || ||||| Sbjct 559842 CTCGGGCTGATAAGGAGTGTAGGATGTGTACCAAGCGGGGTTTTCAAGCAGATTCCGCTG 559901 Query 140039 TATGAC 140044 || || Sbjct 559902 GATCAC 559907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997922326320