Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq65 140 4e-27 seq45 140 4e-27 seq31 96.9 4e-14 seq41 93.3 5e-13 >seq65 Length=94251 Score = 140 bits (154), Expect = 4e-27 Identities = 267/394 (68%), Gaps = 17/394 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| | || |||| ||| || || | | ||| || | || ||||||||| Sbjct 83891 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGA 83832 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGC 1630183 | ||||||||| || || | ||| | |||| || | | ||||| | ||| | | Sbjct 83831 CGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA-C 83773 Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243 | ||||| || || | ||||||||| || || || ||||| ||||| |||||||| | Sbjct 83772 CAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGT 83713 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 |||| |||||| |||||||| | || | || || || || | ||||| || | || | Sbjct 83712 CGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTAC 83653 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363 |||| || || || || |||| ||| |||||| || | ||||||| || ||| | Sbjct 83652 CGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACG 83593 Query 1630364 TGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGA 1630423 | ||| |||| | | ||||| |||| | || ||||| | Sbjct 83592 TCTCGATGACGCTGGGAATGTCATCG---------------CCATGGATACCAATGGCCA 83548 Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 | ||||||| ||||| |||||| | |||| |||| Sbjct 83547 CACGCATGACCATGTGCTGGGGTCTCTCGGCGAC 83514 >seq45 Length=88998 Score = 140 bits (154), Expect = 4e-27 Identities = 232/330 (70%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 |||| |||||| ||| ||| || | | |||||| |||||||||||||| | || Sbjct 64819 GACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAG 64878 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803 ||||| |||||| | ||||||||| | | ||||||||||| | ||| || || Sbjct 64879 AGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCCCAG 64938 Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863 || ||||| ||||| || |||||||| | |||||||||||| ||| | |||||| Sbjct 64939 AGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCAT 64998 Query 868864 GCCGATGAGCGCCACCGGCAGCGACTCGCT-CACAAACTCTTTCTCGATCTCGACGGCCT 868922 || | || || ||||| | ||| | | | |||||| |||||||||||||||| Sbjct 64999 ACCCAGCAGGTTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCT 65057 Query 868923 CGACGATGATCTGCCTGGGCAC---GTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGA 868979 || |||||||| || |||| |||| || ||||| ||| || | ||| Sbjct 65058 CGGTGATGATCT---TGAGCACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGA 65114 Query 868980 GCAGGCAGGCAAAGTCGCAGTGCA-ACCCT 869008 |||| |||||||||||| |||| ||||| Sbjct 65115 GCAGACAGGCAAAGTCGGTATGCAGACCCT 65144 Score = 129 bits (142), Expect = 7e-24 Identities = 215/309 (70%), Gaps = 10/309 (3%) Strand=Plus/Plus Query 869158 GGCAAAGAGGGCACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAG 869217 ||||||| || ||||| ||| ||||| | | ||||| ||||| |||| || Sbjct 65122 GGCAAAGTCGG---TATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAG 65178 Query 869218 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAA 869277 || ||||| || || | |||||||||||| ||||| | | || ||| ||||| || Sbjct 65179 ACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAA 65238 Query 869278 GATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGC--CCTCC 869335 || ||||| ||||| ||||| | | ||| | ||||||||| | ||| |||| Sbjct 65239 AATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAA-----CAGGGCTTCCTCG 65293 Query 869336 TTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATG 869395 | ||||||||| |||| ||||| |||||||| | | | | | || | || || ||| Sbjct 65294 TCGTTGATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATG 65353 Query 869396 GCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAA 869455 ||| || ||| || ||| ||||||||||| |||||||||||||| ||||| Sbjct 65354 GCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAG 65413 Query 869456 TAGGTCTCC 869464 || || ||| Sbjct 65414 TACGTTTCC 65422 >seq31 Length=237046 Score = 96.9 bits (106), Expect = 4e-14 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 509048 GGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATGTTTCTGCACATG 509107 || |||||||||||||| | | ||| |||| ||| |||| | | | ||| Sbjct 42165 GGGTTTGTGCGCAACTCTTTCTTTTCCGGGCTCAGTCCGCCCGAGTTCCTGTTCCACGCC 42106 Query 509108 ATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTACATC 509167 ||| ||| | ||||| || || || ||||| |||||||| || ||||||||||||| | Sbjct 42105 ATCTCCGGCAGAGAGGGGCTAGTGGATACGGCTGTCAAGACCGCAGAGACGGGCTACACC 42046 Query 509168 CAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAGATCAAGC-GCGGCGGCCTCGTGCG 509226 ||| ||| || |||||||||||| |||| || | || || || |||||| Sbjct 42045 TCGCGGCGGCTGATGAAGTCGATGGAGGACCTG-AGTGCCGGCTACGACGAGACCGTGCG 41987 Query 509227 CAACGCCAACGGCGACATCGTCCAGTTTGCCTATGGCGGCGACGG 509271 |||| | | | || |||||| ||||| |||||| |||||||| Sbjct 41986 CAACTCGAGCAACGGCATCGTGCAGTTCAACTATGGAGGCGACGG 41942 >seq41 Length=842168 Score = 93.3 bits (102), Expect = 5e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1592174 GAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAG 1592233 ||| | || || || ||||| |||||| |||||||||| ||||| | || |||||| Sbjct 513043 GAGATCATTCTTGCTGCCAATTACCTCAACATCAAGCCGCTGCTGAACGCCGGATGCAAG 513102 Query 1592234 TCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 |||||| | |||||| |||||||| || ||||||||||||||||| || ||||| Sbjct 513103 GTTGTGGCGGAGATGATCCGCGGCAAGTCTCCTGAGGAGATCCGCAAGACTTTCAACAT 513161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107133783730922