Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq65 140 4e-27
seq45 140 4e-27
seq31 96.9 4e-14
seq41 93.3 5e-13
>seq65
Length=94251
Score = 140 bits (154), Expect = 4e-27
Identities = 267/394 (68%), Gaps = 17/394 (4%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||||||||| | || |||| ||| || || | | ||| || | || |||||||||
Sbjct 83891 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGA 83832
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGC 1630183
| ||||||||| || || | ||| | |||| || | | ||||| | ||| | |
Sbjct 83831 CGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA-C 83773
Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243
| ||||| || || | ||||||||| || || || ||||| ||||| |||||||| |
Sbjct 83772 CAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGT 83713
Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303
|||| |||||| |||||||| | || | || || || || | ||||| || | || |
Sbjct 83712 CGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTAC 83653
Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363
|||| || || || || |||| ||| |||||| || | ||||||| || ||| |
Sbjct 83652 CGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACG 83593
Query 1630364 TGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGA 1630423
| ||| |||| | | ||||| |||| | || ||||| |
Sbjct 83592 TCTCGATGACGCTGGGAATGTCATCG---------------CCATGGATACCAATGGCCA 83548
Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457
| ||||||| ||||| |||||| | |||| ||||
Sbjct 83547 CACGCATGACCATGTGCTGGGGTCTCTCGGCGAC 83514
>seq45
Length=88998
Score = 140 bits (154), Expect = 4e-27
Identities = 232/330 (70%), Gaps = 9/330 (3%)
Strand=Plus/Plus
Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743
|||| |||||| ||| ||| || | | |||||| |||||||||||||| | ||
Sbjct 64819 GACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAG 64878
Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803
||||| |||||| | ||||||||| | | ||||||||||| | ||| || ||
Sbjct 64879 AGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCCCAG 64938
Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863
|| ||||| ||||| || |||||||| | |||||||||||| ||| | ||||||
Sbjct 64939 AGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCAT 64998
Query 868864 GCCGATGAGCGCCACCGGCAGCGACTCGCT-CACAAACTCTTTCTCGATCTCGACGGCCT 868922
|| | || || ||||| | ||| | | | |||||| ||||||||||||||||
Sbjct 64999 ACCCAGCAGGTTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCT 65057
Query 868923 CGACGATGATCTGCCTGGGCAC---GTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGA 868979
|| |||||||| || |||| |||| || ||||| ||| || | |||
Sbjct 65058 CGGTGATGATCT---TGAGCACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGA 65114
Query 868980 GCAGGCAGGCAAAGTCGCAGTGCA-ACCCT 869008
|||| |||||||||||| |||| |||||
Sbjct 65115 GCAGACAGGCAAAGTCGGTATGCAGACCCT 65144
Score = 129 bits (142), Expect = 7e-24
Identities = 215/309 (70%), Gaps = 10/309 (3%)
Strand=Plus/Plus
Query 869158 GGCAAAGAGGGCACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAG 869217
||||||| || ||||| ||| ||||| | | ||||| ||||| |||| ||
Sbjct 65122 GGCAAAGTCGG---TATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAG 65178
Query 869218 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAA 869277
|| ||||| || || | |||||||||||| ||||| | | || ||| ||||| ||
Sbjct 65179 ACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAA 65238
Query 869278 GATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGC--CCTCC 869335
|| ||||| ||||| ||||| | | ||| | ||||||||| | ||| ||||
Sbjct 65239 AATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAA-----CAGGGCTTCCTCG 65293
Query 869336 TTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATG 869395
| ||||||||| |||| ||||| |||||||| | | | | | || | || || |||
Sbjct 65294 TCGTTGATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATG 65353
Query 869396 GCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAA 869455
||| || ||| || ||| ||||||||||| |||||||||||||| |||||
Sbjct 65354 GCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAG 65413
Query 869456 TAGGTCTCC 869464
|| || |||
Sbjct 65414 TACGTTTCC 65422
>seq31
Length=237046
Score = 96.9 bits (106), Expect = 4e-14
Identities = 158/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 509048 GGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATGTTTCTGCACATG 509107
|| |||||||||||||| | | ||| |||| ||| |||| | | | |||
Sbjct 42165 GGGTTTGTGCGCAACTCTTTCTTTTCCGGGCTCAGTCCGCCCGAGTTCCTGTTCCACGCC 42106
Query 509108 ATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTACATC 509167
||| ||| | ||||| || || || ||||| |||||||| || ||||||||||||| |
Sbjct 42105 ATCTCCGGCAGAGAGGGGCTAGTGGATACGGCTGTCAAGACCGCAGAGACGGGCTACACC 42046
Query 509168 CAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAGATCAAGC-GCGGCGGCCTCGTGCG 509226
||| ||| || |||||||||||| |||| || | || || || ||||||
Sbjct 42045 TCGCGGCGGCTGATGAAGTCGATGGAGGACCTG-AGTGCCGGCTACGACGAGACCGTGCG 41987
Query 509227 CAACGCCAACGGCGACATCGTCCAGTTTGCCTATGGCGGCGACGG 509271
|||| | | | || |||||| ||||| |||||| ||||||||
Sbjct 41986 CAACTCGAGCAACGGCATCGTGCAGTTCAACTATGGAGGCGACGG 41942
>seq41
Length=842168
Score = 93.3 bits (102), Expect = 5e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 1592174 GAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAG 1592233
||| | || || || ||||| |||||| |||||||||| ||||| | || ||||||
Sbjct 513043 GAGATCATTCTTGCTGCCAATTACCTCAACATCAAGCCGCTGCTGAACGCCGGATGCAAG 513102
Query 1592234 TCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
|||||| | |||||| |||||||| || ||||||||||||||||| || |||||
Sbjct 513103 GTTGTGGCGGAGATGATCCGCGGCAAGTCTCCTGAGGAGATCCGCAAGACTTTCAACAT 513161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107133783730922
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |