Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq65 140 3e-28 seq64 109 5e-19 seq61 107 2e-18 >seq65 Length=94251 Score = 140 bits (154), Expect = 3e-28 Identities = 955/1514 (63%), Gaps = 46/1514 (3%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | || ||| || ||||| || | |||| | ||| |||||| |||| |||| Sbjct 84950 GTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGG 84891 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| || | ||||| | ||||| |||||| | || | |||||| ||||| ||||| Sbjct 84890 CTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCCAC 84831 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 ||| || ||||| | | || | || ||| || |||||||||| ||||||||| Sbjct 84830 CAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCA 84771 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 || |||| | || || ||| ||| | ||| |||| || || ||| || || Sbjct 84770 CAGATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGCGACGCCGGCGA 84711 Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCG 138799 || || | | |||||| || | | || | |||| |||| ||||| | | Sbjct 84710 TCCCTCAAAGGTCTCGTATTTGCC-ATCCCTAACGGCCAGCTCGGCAGAGGCCTCCAAAG 84652 Query 138800 CACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGT 138859 | || | ||| || || ||| |||||| || ||| || |||||| | || Sbjct 84651 CCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCTGGTGAGTCAA 84592 Query 138860 ACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919 | |||| | ||| | ||||| |||||||||| || || || ||||| | | || | Sbjct 84591 AAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGGCAATCGGCC 84532 Query 138920 GATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTT 138979 | ||||| || || | | |||| || | ||||||||||||| |||||||| | Sbjct 84531 TGTTGCGCATGTTGGATGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGTCGATGATCT 84472 Query 138980 TGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGC 139039 |||| | || ||| ||||| || | || | | ||| || | ||| || Sbjct 84471 TGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGTTGTACCAGC 84412 Query 139040 CCCCGTTGTCGTCGACGACGTCGACAAATTTGTTG--ACACAAATCGAGGCTATGTTGCA 139097 ||||||||| ||| || || || | || | ||||| || | || || Sbjct 84411 TGGTATTGTCGTCG--GAC-TCAACGAA--GGCTGGAAGGGCGATCGACGCCAAATTACA 84357 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 ||| ||||| || || || ||| |||||||||||| ||||||||| |||| Sbjct 84356 CACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCACAAATTAGACGACTT 84297 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 ||| |||| | || | || ||| | || ||| || || || ||||| ||||| | Sbjct 84296 GATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTGTACAGCATGAA 84237 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-AGTCCCTAGCTTG-- 139274 || ||||| |||||| || | ||| | |||| | ||| || | |||| Sbjct 84236 TGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTCTGTGCCTTGAC 84177 Query 139275 TATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTT 139333 | || || | | | | || ||||| | |||||| || | ||| ||| | Sbjct 84176 CGTCTGGCGTCC---ACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTTGAACTCG-T 84121 Query 139334 CACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGT 139393 | ||||| |||| ||||| | || || | ||| | | |||| ||| | ||| Sbjct 84120 CGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCACTCAGCGT 84061 Query 139394 TCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACA---AAGCGAACAGCAAATCGC 139450 || || ||| | | ||||||||| || |||||||||| || |||||| || | Sbjct 84060 TCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAG---GTCTC 84004 Query 139451 GCGCCTTCTTATCT--TCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACG 139506 || ||| |||| ||| | ||||| | | || | |||| | || ||||||| Sbjct 84003 TGGC--TCTGATCTCCTCCTTA-CCATGGTTC-TTCCGGATGTCGATAAAGTCAAAAATA 83948 Query 139507 TCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGA 139563 || | ||||||||| || | || | || | ||||| ||| ||||| || || Sbjct 83947 TCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGG 83888 Query 139564 TCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTT 139623 ||||||| || | | || ||||| || | || ||| || | ||| | | || Sbjct 83887 TCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTG 83828 Query 139624 CCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCG 139680 |||||||| | | |||| | | | || | || | || || | | | || Sbjct 83827 CCGTTGGTTCCAGCGATGTAAGACCCGGTG---GATCTAATGTTGTGAATGTGCAGACCA 83771 Query 139681 ATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCT 139739 || || || || ||||| || | | | || || | | || || || || || Sbjct 83770 ATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTG-AGGGTGTCATAGATGCCGTC 83712 Query 139740 TATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCC 139799 ||| |||||||| ||| | |||| || || || || | ||||| | || || Sbjct 83711 GATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACC 83652 Query 139800 GGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGT 139859 ||| ||||||||| || |||||| ||||| | || || |||||||| | |||||| Sbjct 83651 GGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGT 83592 Query 139860 TTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATG 139919 |||||| |||| ||| || || |||||||| | | || ||||| | ||| || Sbjct 83591 CTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTG 83532 Query 139920 TTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTC 139977 ||| | ||||| || || || || || ||||| |||| ||| || ||| Sbjct 83531 CTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG--CTCCAGCGTC 83474 Query 139978 TTGTAGCCAAAGTA 139991 ||| ||||||| || Sbjct 83473 TTGAAGCCAAAATA 83460 >seq64 Length=816055 Score = 109 bits (120), Expect = 5e-19 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||| || || || || | || || || | || Sbjct 728498 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCTTCC 728557 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||||||||||| ||||| || || Sbjct 728558 GACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGACCAG 728617 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||| ||||| || || || ||||| |||| | | ||||| || ||| Sbjct 728618 CAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTACAAC 728677 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 || ||||| || || || | || ||||| || || || | || || | ||||||| Sbjct 728678 ATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGGTATCATTGAGCCA 728737 >seq61 Length=567400 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| | ||||| || || || || || || || || || | Sbjct 445377 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445318 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || || ||||| || |||||||| ||||| || || Sbjct 445317 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445258 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | || ||||| || || ||||| || || |||| |||| ||||| ||| Sbjct 445257 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445198 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| ||||| | ||| |||| ||| ||||| | || || Sbjct 445197 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGG 445151 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| | ||||| || || || || || || || || || | Sbjct 444921 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 444862 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || || ||||| || |||||||| || || || || Sbjct 444861 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 444802 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | || || || || || || || || || |||| | || || |||||| Sbjct 444801 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 444742 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| ||||| | || |||| ||| ||||| | || || Sbjct 444741 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGG 444695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897228834480