Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq65 140 3e-28
seq64 109 5e-19
seq61 107 2e-18
>seq65
Length=94251
Score = 140 bits (154), Expect = 3e-28
Identities = 955/1514 (63%), Gaps = 46/1514 (3%)
Strand=Plus/Minus
Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560
||| | || ||| || ||||| || | |||| | ||| |||||| |||| ||||
Sbjct 84950 GTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGG 84891
Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620
||| || | ||||| | ||||| |||||| | || | |||||| ||||| |||||
Sbjct 84890 CTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCCAC 84831
Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680
||| || ||||| | | || | || ||| || |||||||||| |||||||||
Sbjct 84830 CAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCA 84771
Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740
|| |||| | || || ||| ||| | ||| |||| || || ||| || ||
Sbjct 84770 CAGATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGCGACGCCGGCGA 84711
Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCG 138799
|| || | | |||||| || | | || | |||| |||| ||||| | |
Sbjct 84710 TCCCTCAAAGGTCTCGTATTTGCC-ATCCCTAACGGCCAGCTCGGCAGAGGCCTCCAAAG 84652
Query 138800 CACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGT 138859
| || | ||| || || ||| |||||| || ||| || |||||| | ||
Sbjct 84651 CCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCTGGTGAGTCAA 84592
Query 138860 ACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919
| |||| | ||| | ||||| |||||||||| || || || ||||| | | || |
Sbjct 84591 AAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGGCAATCGGCC 84532
Query 138920 GATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTT 138979
| ||||| || || | | |||| || | ||||||||||||| |||||||| |
Sbjct 84531 TGTTGCGCATGTTGGATGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGTCGATGATCT 84472
Query 138980 TGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGC 139039
|||| | || ||| ||||| || | || | | ||| || | ||| ||
Sbjct 84471 TGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGTTGTACCAGC 84412
Query 139040 CCCCGTTGTCGTCGACGACGTCGACAAATTTGTTG--ACACAAATCGAGGCTATGTTGCA 139097
||||||||| ||| || || || | || | ||||| || | || ||
Sbjct 84411 TGGTATTGTCGTCG--GAC-TCAACGAA--GGCTGGAAGGGCGATCGACGCCAAATTACA 84357
Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157
||| ||||| || || || ||| |||||||||||| ||||||||| ||||
Sbjct 84356 CACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCACAAATTAGACGACTT 84297
Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217
||| |||| | || | || ||| | || ||| || || || ||||| ||||| |
Sbjct 84296 GATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTGTACAGCATGAA 84237
Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-AGTCCCTAGCTTG-- 139274
|| ||||| |||||| || | ||| | |||| | ||| || | ||||
Sbjct 84236 TGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTCTGTGCCTTGAC 84177
Query 139275 TATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTT 139333
| || || | | | | || ||||| | |||||| || | ||| ||| |
Sbjct 84176 CGTCTGGCGTCC---ACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTTGAACTCG-T 84121
Query 139334 CACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGT 139393
| ||||| |||| ||||| | || || | ||| | | |||| ||| | |||
Sbjct 84120 CGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCACTCAGCGT 84061
Query 139394 TCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACA---AAGCGAACAGCAAATCGC 139450
|| || ||| | | ||||||||| || |||||||||| || |||||| || |
Sbjct 84060 TCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAG---GTCTC 84004
Query 139451 GCGCCTTCTTATCT--TCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACG 139506
|| ||| |||| ||| | ||||| | | || | |||| | || |||||||
Sbjct 84003 TGGC--TCTGATCTCCTCCTTA-CCATGGTTC-TTCCGGATGTCGATAAAGTCAAAAATA 83948
Query 139507 TCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGA 139563
|| | ||||||||| || | || | || | ||||| ||| ||||| || ||
Sbjct 83947 TCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGG 83888
Query 139564 TCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTT 139623
||||||| || | | || ||||| || | || ||| || | ||| | | ||
Sbjct 83887 TCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTG 83828
Query 139624 CCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCG 139680
|||||||| | | |||| | | | || | || | || || | | | ||
Sbjct 83827 CCGTTGGTTCCAGCGATGTAAGACCCGGTG---GATCTAATGTTGTGAATGTGCAGACCA 83771
Query 139681 ATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCT 139739
|| || || || ||||| || | | | || || | | || || || || ||
Sbjct 83770 ATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTG-AGGGTGTCATAGATGCCGTC 83712
Query 139740 TATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCC 139799
||| |||||||| ||| | |||| || || || || | ||||| | || ||
Sbjct 83711 GATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACC 83652
Query 139800 GGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGT 139859
||| ||||||||| || |||||| ||||| | || || |||||||| | ||||||
Sbjct 83651 GGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGT 83592
Query 139860 TTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATG 139919
|||||| |||| ||| || || |||||||| | | || ||||| | ||| ||
Sbjct 83591 CTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTG 83532
Query 139920 TTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTC 139977
||| | ||||| || || || || || ||||| |||| ||| || |||
Sbjct 83531 CTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG--CTCCAGCGTC 83474
Query 139978 TTGTAGCCAAAGTA 139991
||| ||||||| ||
Sbjct 83473 TTGAAGCCAAAATA 83460
>seq64
Length=816055
Score = 109 bits (120), Expect = 5e-19
Identities = 168/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | ||||| || || || || | || || || | ||
Sbjct 728498 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCTTCC 728557
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||||||||| ||||| || ||
Sbjct 728558 GACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGACCAG 728617
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||| ||||| || || || ||||| |||| | | ||||| || |||
Sbjct 728618 CAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTACAAC 728677
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943
|| ||||| || || || | || ||||| || || || | || || | |||||||
Sbjct 728678 ATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGGTATCATTGAGCCA 728737
>seq61
Length=567400
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| | ||||| || || || || || || || || || |
Sbjct 445377 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445318
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || || ||||| || |||||||| ||||| || ||
Sbjct 445317 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445258
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | || ||||| || || ||||| || || |||| |||| ||||| |||
Sbjct 445257 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445198
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| ||||| | ||| |||| ||| ||||| | || ||
Sbjct 445197 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGG 445151
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| | ||||| || || || || || || || || || |
Sbjct 444921 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 444862
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || || ||||| || |||||||| || || || ||
Sbjct 444861 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 444802
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | || || || || || || || || || |||| | || || ||||||
Sbjct 444801 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 444742
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| ||||| | || |||| ||| ||||| | || ||
Sbjct 444741 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGG 444695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897228834480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |