Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq45 158 2e-32 seq65 114 2e-19 seq31 86.0 1e-10 >seq45 Length=88998 Score = 158 bits (174), Expect = 2e-32 Identities = 240/336 (71%), Gaps = 13/336 (4%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| | | |||||| ||||| ||| || || ||||| || || | ||| Sbjct 65140 ACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCTCTCTT 65199 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 ||||||||| ||||| | | |||| ||| ||||| || || ||||| ||||| |||| Sbjct 65200 CTTGAGCCAGAAGATCG-AGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCAGCAA 65258 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGC--CCTCTTTGTTGATCCACTTCATCGC 794516 | | ||||| | ||||||||| | ||| |||| | ||||||||| |||| || Sbjct 65259 ACGCAACGAGTCTCTCGGCAAA-----CAGGGCTTCCTCGTCGTTGATCCATCTCATGGC 65313 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC--C 794574 ||| || ||||| | | | | | || | || || |||||| || ||| || | Sbjct 65314 CCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTGAAAAGGAACTCAGC 65373 Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634 ||| | ||||||||||||||||||||||| || |||||||| || || ||||||||| Sbjct 65374 TTCCTTA--GGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGTACGTTTCCGAGTGGATG 65431 Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670 || || || ||||||||| || || || || ||| Sbjct 65432 TTCTCCATCATGATCTGGAACCCGTAGAAACACTTG 65467 Score = 150 bits (166), Expect = 3e-30 Identities = 233/329 (71%), Gaps = 8/329 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||||||||| || ||| || | | |||||| |||||||||||||| | | Sbjct 64818 TGACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAA 64877 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||||||||| | | ||||||||||| ||| || | Sbjct 64878 GAGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCCCA 64937 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | || |||||| ||||| || || || || | |||||||||||| ||| | ||||| Sbjct 64938 GAGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCA 64997 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTG-ACAAACTCTTTCTCGATCTCGACGGCC 794129 | || | || || ||||| | ||| || | | |||||| ||||||||||||||| Sbjct 64998 TACCCAGCAGGTTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCC 65056 Query 794130 TCGATGATGATCTGCCTGGGCAC---GTCGGACGACGGCTTGTCGACGAGCATCGTGTAG 794186 ||| ||||||||| || |||| |||| || ||| | ||| || | || Sbjct 65057 TCGGTGATGATCT---TGAGCACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAG 65113 Query 794187 AGCAGGCAGGCAAAGTCGCAATGCAGACC 794215 ||||| |||||||||||| ||||||||| Sbjct 65114 AGCAGACAGGCAAAGTCGGTATGCAGACC 65142 >seq65 Length=94251 Score = 114 bits (126), Expect = 2e-19 Identities = 186/265 (70%), Gaps = 2/265 (1%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || | || |||| ||| || || | | ||| || | | ||||||||| Sbjct 83891 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGA 83832 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCG-GCAAAGC 2073658 | ||||||||| || || | ||| | || | || | | ||||| | ||| | | Sbjct 83831 CGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA-C 83773 Query 2073659 CGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCT 2073718 | ||||| || || ||||||||||| || || || | || || || || |||||||| | Sbjct 83772 CAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGT 83713 Query 2073719 CGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGC 2073778 |||| |||||| |||||||| | | || || || || || | ||||| | | || | Sbjct 83712 CGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTAC 83653 Query 2073779 CGGCATTGAAGAGCGTGGGCGTCGC 2073803 ||||||| || || || |||| ||| Sbjct 83652 CGGCATTAAACAGAGTTGGCGACGC 83628 >seq31 Length=237046 Score = 86.0 bits (94), Expect = 1e-10 Identities = 155/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 431034 GGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATGTTTCTGCACATG 431093 || |||||||||||||| | | ||| |||| ||| |||| | | | ||| Sbjct 42165 GGGTTTGTGCGCAACTCTTTCTTTTCCGGGCTCAGTCCGCCCGAGTTCCTGTTCCACGCC 42106 Query 431094 ATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTACATC 431153 ||| ||| | ||||| || || || ||||| |||||||| || ||||||||||||| | Sbjct 42105 ATCTCCGGCAGAGAGGGGCTAGTGGATACGGCTGTCAAGACCGCAGAGACGGGCTACACC 42046 Query 431154 CAGCGTCGGTGCATCAAATCGATGGAGAGCCTGCAGATCAAGC-GCGGCGGCCTCGTGCG 431212 ||| ||| || || ||||||||| |||| || | || || || |||||| Sbjct 42045 TCGCGGCGGCTGATGAAGTCGATGGAGGACCTG-AGTGCCGGCTACGACGAGACCGTGCG 41987 Query 431213 CAACGCCAACGGCGACATTGTCCAGTTTGCCTATGGCGGCGACG 431256 |||| | | | || ||| || ||||| |||||| ||||||| Sbjct 41986 CAACTCGAGCAACGGCATCGTGCAGTTCAACTATGGAGGCGACG 41943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916239379278974