Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq61 105 1e-17 >seq61 Length=567400 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| || || ||||| || || || |||| || || | Sbjct 445376 TGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTG 445317 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | ||||| || ||||| ||| ||| ||||| || || || || || | Sbjct 445316 ACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAGC 445257 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||||||||||||||| ||||| || |||| || |||||| | | ||||| || | Sbjct 445256 AAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACA 445197 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| || ||||| | || | || || |||| ||||| |||| Sbjct 445196 TTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGGTA 445149 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| || ||| | || |||||| | | Sbjct 445604 TGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTCTG 445545 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | ||||| ||| || || ||| ||| ||||| || || || || || | Sbjct 445544 ACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCAGC 445485 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||||||||||||||| ||||| || |||| || |||||| | | ||||| || | Sbjct 445484 AAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACA 445425 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| || || | || || || | |||| ||||| |||| Sbjct 445424 TTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGAGGTGGTA 445377 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| || || ||||| || || || |||| || || | Sbjct 444692 TGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTG 444633 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | || || || ||||| || ||| ||||| || || || || || | Sbjct 444632 ACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAGC 444573 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||||||||||||||| ||||| || |||| || |||||| | | ||||| || | Sbjct 444572 AAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACA 444513 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | || || ||||| ||| | ||||| || || || | ||||| ||| Sbjct 444512 TTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGGTGGT 444466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786165751412720