Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq61 122 2e-22 seq64 105 2e-17 >seq61 Length=567400 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| |||||||| || || ||| ||||||||| |||| || || Sbjct 445581 ACCGGCAAAACTATCACTTTAGAGGTAGAATCTTCTGACACTATCGATAATGTCAAATCG 445522 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || |||||||| || ||| |||||||| || || || || ||| Sbjct 445521 AAGATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAAAGACTCATTTTTGCTGGTAAG 445462 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | ||||| || || ||| || ||||||||||| | |||||||||||||| | ||| Sbjct 445461 CAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAAGAGTCTACCTTGCAC 445402 Query 206374 CTTGTTTTGAGA 206385 | || ||||| Sbjct 445401 TTGGTCCTGAGA 445390 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || ||||| | || || || |||||||| |||| Sbjct 444678 AAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAC 444619 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || ||||| || || |||||||| || ||| |||||||| || || Sbjct 444618 GTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTCATTTTT 444559 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | ||||| || || ||| || ||||||||||| | ||||| || ||| Sbjct 444558 GCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAGGAATCT 444499 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 |||||||| | ||||||||||| Sbjct 444498 ACTCTTCATTTGGTTTTGAGACT 444476 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || ||||| | || || || |||||||| |||| Sbjct 445362 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445303 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || |||||||| || |||||||| || ||| |||||||| || || Sbjct 445302 GTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAAAGACTCATTTTT 445243 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | ||||| || || ||| || ||||||||||| | || || ||||| Sbjct 445242 GCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAAAAGGAGTCG 445183 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || | ||||| ||||||||| Sbjct 445182 ACCTTGCACCTGGTTTTGAGA 445162 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || ||||| | || || || |||||||| |||| Sbjct 444906 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 444847 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || |||||||| || |||||||| || ||| ||||||||||| ||| Sbjct 444846 GTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTTATTTTC 444787 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | ||||| || || || || |||| || ||| | || || ||||| Sbjct 444786 GCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAACATTCAAAAGGAGTCG 444727 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || | || || ||||||||| Sbjct 444726 ACCTTGCATCTGGTTTTGAGA 444706 Score = 87.8 bits (96), Expect = 4e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || ||||| | || || || |||||||| |||| Sbjct 445134 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445075 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| | ||| ||||| || ||||| || || ||| || || ||| | || || Sbjct 445074 GTGAAATCTAAA-ATTCAGGATAAAGAGGGTATCCCGCCTGATCAACAGAGATTGATTTT 445016 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||| | ||||| || || ||| || | ||||||||| | ||||||||||| Sbjct 445015 CGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAACATTCAGAAAGAGTC 444956 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | ||||| || ||||| Sbjct 444955 TACCTTGCACCTGGTCCTGAGA 444934 >seq64 Length=816055 Score = 105 bits (116), Expect = 2e-17 Identities = 158/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| || ||| || | || ||||| || ||||| ||||| || || Sbjct 728495 AAAATG---CAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAG 728551 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||| ||||| |||| || ||| ||||| ||||| ||||||||||| || Sbjct 728552 TCTTCCGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCT 728611 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| |||||| | ||||||||||| ||||| | || || || || || | | || Sbjct 728612 GACCAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGAC 728671 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||| |||| |||||||| ||| | || | ||| ||||||| Sbjct 728672 TACAACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACT 728715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819800622786