Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq61 122 2e-22
seq64 105 2e-17
>seq61
Length=567400
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || ||||| |||||||| || || ||| ||||||||| |||| || ||
Sbjct 445581 ACCGGCAAAACTATCACTTTAGAGGTAGAATCTTCTGACACTATCGATAATGTCAAATCG 445522
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || |||||||| || ||| |||||||| || || || || |||
Sbjct 445521 AAGATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAAAGACTCATTTTTGCTGGTAAG 445462
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | ||||| || || ||| || ||||||||||| | |||||||||||||| | |||
Sbjct 445461 CAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAAGAGTCTACCTTGCAC 445402
Query 206374 CTTGTTTTGAGA 206385
| || |||||
Sbjct 445401 TTGGTCCTGAGA 445390
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || ||||| || ||||| | || || || |||||||| ||||
Sbjct 444678 AAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAC 444619
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || ||||| || || |||||||| || ||| |||||||| || ||
Sbjct 444618 GTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTCATTTTT 444559
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | ||||| || || ||| || ||||||||||| | ||||| || |||
Sbjct 444558 GCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAGGAATCT 444499
Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387
|||||||| | |||||||||||
Sbjct 444498 ACTCTTCATTTGGTTTTGAGACT 444476
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || ||||| || ||||| | || || || |||||||| ||||
Sbjct 445362 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445303
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || |||||||| || |||||||| || ||| |||||||| || ||
Sbjct 445302 GTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAAAGACTCATTTTT 445243
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | ||||| || || ||| || ||||||||||| | || || |||||
Sbjct 445242 GCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAAAAGGAGTCG 445183
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| | ||||| |||||||||
Sbjct 445182 ACCTTGCACCTGGTTTTGAGA 445162
Score = 93.3 bits (102), Expect = 1e-13
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || ||||| || ||||| | || || || |||||||| ||||
Sbjct 444906 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 444847
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || |||||||| || |||||||| || ||| ||||||||||| |||
Sbjct 444846 GTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTTATTTTC 444787
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| | ||||| || || || || |||| || ||| | || || |||||
Sbjct 444786 GCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAACATTCAAAAGGAGTCG 444727
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| | || || |||||||||
Sbjct 444726 ACCTTGCATCTGGTTTTGAGA 444706
Score = 87.8 bits (96), Expect = 4e-12
Identities = 142/202 (70%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || ||||| || ||||| | || || || |||||||| ||||
Sbjct 445134 AAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGACACTATCGATAAT 445075
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| | ||| ||||| || ||||| || || ||| || || ||| | || ||
Sbjct 445074 GTGAAATCTAAA-ATTCAGGATAAAGAGGGTATCCCGCCTGATCAACAGAGATTGATTTT 445016
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||| | ||||| || || ||| || | ||||||||| | |||||||||||
Sbjct 445015 CGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAACATTCAGAAAGAGTC 444956
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
||| | ||||| || |||||
Sbjct 444955 TACCTTGCACCTGGTCCTGAGA 444934
>seq64
Length=816055
Score = 105 bits (116), Expect = 2e-17
Identities = 158/224 (71%), Gaps = 3/224 (1%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| || ||| || | || ||||| || ||||| ||||| || ||
Sbjct 728495 AAAATG---CAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAG 728551
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
||| ||||| |||| || ||| ||||| ||||| ||||||||||| ||
Sbjct 728552 TCTTCCGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCT 728611
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| |||||| | ||||||||||| ||||| | || || || || || | | ||
Sbjct 728612 GACCAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGAC 728671
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|||||| |||| |||||||| ||| | || | ||| |||||||
Sbjct 728672 TACAACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACT 728715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819800622786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |