Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq45 194 2e-43
seq65 154 2e-31
seq31 89.7 7e-12
>seq45
Length=88998
Score = 194 bits (214), Expect = 2e-43
Identities = 375/540 (69%), Gaps = 20/540 (4%)
Strand=Plus/Minus
Query 1455746 TTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGC 1455805
|||||| ||||||| ||| ||||| ||| ||| | |||||| || ||||| |||||
Sbjct 65706 TTTGTCTTGTTCCCTATCAAGTACCACGAGATTTGGCAGATGTAC-AAGAAGGCAGAGGC 65648
Query 1455806 CTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCG-- 1455863
||| || |||||||| ||||| |||| || | ||| | | |||||
Sbjct 65647 CTCGTTCTGGACCGCAGAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACAACAG 65588
Query 1455864 -CTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCG 1455922
|| | |||| ||||| | | || | | || | ||||| ||| || || |
Sbjct 65587 ACTCAACGACAACGAGAGATACTTTGTTTCGAGAGTGTTGGCCTTCTTT-GCTGCTTCGG 65529
Query 1455923 ATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT-TATGAAAGAGGTCCAATTGCCAGAG 1455981
| ||||| || ||||||| ||| || ||| | || ||||| ||| | || |||
Sbjct 65528 ACGGCATTGTCAACGAGAACTTGGTCGAGAACTTCTCTGCC-GAGGTGCAAGTTCCTGAG 65470
Query 1455982 GCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040
|| | ||||| ||||||||||||||| || || ||||||||||| ||||| |||||
Sbjct 65469 GC-CAAGTGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTC 65411
Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAG--GACCACCTCTTTCGCGCC 1456098
||| |||||||||||||||||||||||||| | |||| || ||| || ||||
Sbjct 65410 GCTTCTGATCGACACCTACGTCAAGGACCC--TAAGGAAGCTGAGTTCCTTTTCAACGCC 65353
Query 1456099 ATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAG 1456158
|| || || | || | | | | | |||||||| ||||| |||| ||||||||| |
Sbjct 65352 ATTGAGACCATCCCATGTATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCAACGAC 65293
Query 1456159 GAGG--GCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTT 1456215
|||| ||| | ||||||||| | ||||| | ||||| | ||| ||||| || ||
Sbjct 65292 GAGGAAGCC----CTGTTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTT 65237
Query 1456216 TTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||| ||| || | | ||||| |||||||||||| | || || ||||| |||||
Sbjct 65236 CTTCTCTGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCT 65177
Score = 129 bits (142), Expect = 8e-24
Identities = 231/328 (70%), Gaps = 12/328 (4%)
Strand=Plus/Minus
Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGAC---GTGCCC 1456516
||||||||||||||||||| | || ||| ||||| || | |||| |||| |
Sbjct 65130 GACTTTGCCTGTCTGCTCTTCTCGCACCTCAACAACACCCCAAACAGCGACATCGTGCTC 65071
Query 1456517 AAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGT-CAGCGAGTCGCTGCC 1456575
||| |||||| |||||||||||||||||| |||||| | | || ||| | |||||
Sbjct 65070 AAG---ATCATCACCGAGGCCGTCGAGATCGA-AAAGAGATACTTCACCGACGCCCTGCC 65015
Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635
|| || | || |||||| || | || |||||||||||| | || ||| || ||
Sbjct 65014 TGTCAACCTGCTGGGTATGAACTGCAAC-CTGATGTGCCAGTACGTGGAGTTT-GTTGCT 64957
Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695
||||| ||||| | || |||||| ||||||||||| | | |||||||||
Sbjct 64956 GACCGGCTGCTTTTATCTCTGGGCTGCA-AGAAGCACTACAACGCCACAAACCCGTTCGA 64898
Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGA 1456754
| |||||| ||||| || | |||||||||||||| |||||| | || |||
Sbjct 64897 CTTCATGGAGAACATCTCTCTTGCAGGCAAGACCAACTTCTTCGAGAAGAGAGTCTCCGA 64838
Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCAAG 1456782
||| ||||| ||||||| ||||||
Sbjct 64837 TTACCAGAAGGCGGGCGTCATGGCCAAG 64810
>seq65
Length=94251
Score = 154 bits (170), Expect = 2e-31
Identities = 207/288 (72%), Gaps = 0/288 (0%)
Strand=Plus/Plus
Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954
|||||||| | || |||||| ||| |||| || || ||||||||||| || || |
Sbjct 83604 ATGTCGCAAAAATTCTTCACCCACGCGTCGCCAACTCTGTTTAATGCCGGTACTCCTCAT 83663
Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014
||||||| || || || || || | | |||||||| ||| || ||||| |||||||||
Sbjct 83664 CCGCAGATGTCTTCCTGTTTCTTGGTTGCCATGAAGGACGACTCCATCGACGGCATCTAT 83723
Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074
||||| |||||| || || || ||||||||||| || || ||||| ||| | |
Sbjct 83724 GACACCCTCAAGACCTGTGCTCTGATCTCCAAGGCTGCTGGAGGCATTGGTCTGCACATT 83783
Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134
||||| | | || | || | ||| | || || ||||||||| |||||||||| |
Sbjct 83784 CACAACATTAGATCCACCGGGTCTTACATCGCTGGAACCAACGGCACGTCCAACGGCATC 83843
Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
| || ||| | | || || ||| |||| || | ||||||||||||
Sbjct 83844 ATTCCAATGGTGAGAGTGTTCAACAACACCGCCAGATACGTCGACCAG 83891
>seq31
Length=237046
Score = 89.7 bits (98), Expect = 7e-12
Identities = 174/252 (69%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 1816023 CGCGCTCAATGTAGGTGGCGTCGGCGCCGTCGCCGCCATATGCAAACTGGACAATGTCGC 1816082
||| ||| |||| | | |||| |||||||| ||||| ||||| || ||| ||
Sbjct 41916 CGCCCTCCATGTCGAGCGGGTCGAGCCCGTCGCCTCCATAGTTGAACTGCACGATGCCGT 41975
Query 1816083 CGTTGGCGTTGCGCACGAGGCCGCCGC-GCTTGATCTGCAGGCTCTCCATCGACTTGATG 1816141
| | | |||||||||| || || || | || |||| |||||||||||| ||
Sbjct 41976 TGCTCGAGTTGCGCACGGTCTCGTCGTAGCCGGCACT-CAGGTCCTCCATCGACTTCATC 42034
Query 1816142 CACCGGCGCTGGATGTAGCCACGTC-CGGCGGTCTTGACGGCCGTGTCGACCAGGCCCTC 1816200
||| ||| | ||||||| |||| | ||||||||||| ||||| || || || |||||
Sbjct 42035 AGCCGCCGCGAGGTGTAGCC-CGTCTCTGCGGTCTTGACAGCCGTATCCACTAGCCCCTC 42093
Query 1816201 GCGGCCGCCGATCATGTGCAAAAACATCTCGCGCGAGTTGAGGCCGCGCTCGTACGAGTT 1816260
| |||| ||| ||| || | | |||| ||| |||| ||| | | |||||
Sbjct 42094 TCTGCCGGAGATGGCGTGGAACAGGAACTCGGGCGGACTGAGCCCGGAAAAGAAAGAGTT 42153
Query 1816261 GCGCACAAAGCC 1816272
||||||||| ||
Sbjct 42154 GCGCACAAACCC 42165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177804834178692
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