Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq65 316 3e-81 seq45 96.9 4e-15 seq47 95.1 2e-14 seq59 91.5 2e-13 >seq65 Length=94251 Score = 316 bits (350), Expect = 3e-81 Identities = 1137/1755 (65%), Gaps = 41/1755 (2%) Strand=Plus/Minus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413 |||| | || ||| |||||||| |||||||||||||||| ||||| | || | ||| Sbjct 85264 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 85205 Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTT 110471 || || | | |||| ||| ||||| | | | | || ||||| ||| |||| Sbjct 85204 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACT-- 85147 Query 110472 GGTCAATGAA-GCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCC 110530 |||| ||| | ||||| | || | |||||||| || || | ||| | ||| ||| Sbjct 85146 GGTCGATGTACGCGCCTCTGTCG-GCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCC 85088 Query 110531 CAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAA 110590 || || ||||| || || | ||| | || | ||| | || || | |||||||| || Sbjct 85087 CAGACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAG 85028 Query 110591 CCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGG 110650 || |||| | |||| || |||||| | | ||| | |||| || ||| Sbjct 85027 CCGTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTTCCACAATCCAAGGTTAACAAGG 84968 Query 110651 TCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAG 110710 || | | | || | |||||| || |||||||| || || |||||| |||| Sbjct 84967 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 84908 Query 110711 ATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCT 110770 ||||| | ||||| || || || || || |||| ||||| || || | || || || Sbjct 84907 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 84848 Query 110771 GTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTG 110830 |||||||| || |||| ||| || || | || || | || || ||| || ||||| Sbjct 84847 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 84788 Query 110831 AGAACATCCCAGTCGTAGTTGAGCTTGGTTT-CACCTT--CCCACATGTCAAACTGAAGC 110887 || |||||||| | || | |||| | ||| |||| | ||| ||||| | Sbjct 84787 AGCGAGTCCCAGTCCCAC---AGATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAA 84731 Query 110888 ACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAAT 110947 | || || ||||| || || ||||||||||| || || || | | |||| Sbjct 84730 ATACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGC 84671 Query 110948 TCA-CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 111006 || ||| ||||||| | |||| || ||||| || || || | |||| ||| Sbjct 84670 TCGGCAGAG-GCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTC 84612 Query 111007 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTT 111065 |||| || ||| ||||| | | || || | || || || || || || || | Sbjct 84611 TCTGGCCTCTGGTGAGTCAAAAG-GCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCT 84553 Query 111066 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGA 111124 | ||||||| |||| || |||| ||||| || || ||| || ||| ||| ||| Sbjct 84552 GGACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGA 84494 Query 111125 TAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGA 111184 ||| | |||||||| |||| ||| || || || || |||| ||| ||||| | || Sbjct 84493 TAATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGC 84434 Query 111185 AGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCG 111238 || ||||| | | | || || | || | | || | |||||||||| Sbjct 84433 AGCTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCG 84374 Query 111239 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298 || || |||||||| || || ||| ||| || | || |||||| | |||||| Sbjct 84373 ATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAG 84314 Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358 || || || || ||| || | || | ||||| ||||| |||| |||||| || Sbjct 84313 CACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCG 84254 Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA- 111417 |||||||| |||||| | ||||| || || |||||||| | | | ||| || | ||| Sbjct 84253 TCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCAC 84194 Query 111418 AACATCGGCGGCTGGTAC-AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGA 111476 | | || | | || | | |||||| | || || ||| ||||| | ||||||| Sbjct 84193 AGCTTCTGTGCCTTGACCGTCTGGCGT--CCACGGCCTTCCTTTTCGTATCTGGTGTAGA 84136 Query 111477 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 111536 | | | ||||| || || | ||||||| || ||||| |||| | || |||| | Sbjct 84135 GCTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACA 84076 Query 111537 GAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 111596 | | ||| | | | | ||| || | || |||||| ||||||||||||||||| | | Sbjct 84075 GCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAG 84016 Query 111597 AAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 111655 || || ||||| | | || ||| || | ||| ||||| || | || | || Sbjct 84015 GGAACAGGTCTCTGGCTCTGA-TCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAG 83957 Query 111656 TCCATGATATCCGCGTGCCATGGCTCA------AGATAGACTGCGATAGATCCCTT-TCG 111708 || | ||||||| ||||||||||||| ||| | ||| || | ||| | | Sbjct 83956 TCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTG 83897 Query 111709 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768 | ||| || | || || | || ||| ||| || || | | ||||||||| || Sbjct 83896 CCTCCC----TGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGAT 83841 Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828 || | || || || || || || ||| ||| ||| | | || || Sbjct 83840 GCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAAT 83781 Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888 ||||| ||||| || ||||| ||| ||||| | ||||| | | || || |||| Sbjct 83780 GTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATA 83721 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 ||| |||| ||| ||||| ||||| |||| | | ||| || ||||||||||| Sbjct 83720 GATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATG 83661 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 112008 || ||||| ||||| || || ||||| | ||||| |||| | ||| |||||| Sbjct 83660 AGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAG 83601 Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 || ||| ||||| | ||| |||||| || || ||||| || || || || ||||| Sbjct 83600 GTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCAT 83541 Query 112069 GAACATGTACTGTGG 112083 || ||||| ||| || Sbjct 83540 GACCATGTGCTGGGG 83526 >seq45 Length=88998 Score = 96.9 bits (106), Expect = 4e-15 Identities = 328/502 (65%), Gaps = 8/502 (2%) Strand=Plus/Plus Query 122379 GACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAA 122438 ||| | |||||| |||||||||||||| || |||| ||||| ||||| ||||| || Sbjct 64843 GACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAGAGAGATGTTCTCCATGAAGTCGAA 64902 Query 122439 TGGATTCTTCGCGTTCCAAATGGGTG--GCACCCCAACTTGTTTGAGGAGACGATCCGAC 122496 || || | ||||| | || | ||| |||| | || || || || | Sbjct 64903 CGGGTTTGTGGCGTTGTAG-TGCTTCTTGCAGCCCAGAGA-TAAAAGCAGCCGGTCAGCA 64960 Query 122497 ACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT-ACATGGGAG 122555 ||| |||| | ||||| | ||||| | |||||||||| | ||||| ||| || || Sbjct 64961 ACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAGGTTGACA-GGCAG 65019 Query 122556 TGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGT 122615 ||||| || | | | || || ||||| || ||||| | | ||| | | | | Sbjct 65020 GGCGTCGGTGAAGTATCTCTTTTCGATCTCGACGGCCTCGGTGATGATCTTGAGCACGAT 65079 Query 122616 TTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTGGTGGAG 122675 ||| | | || | || | | ||||||| |||||| || || || Sbjct 65080 GTCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTATGCAG 65139 Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 |||||| |||| | | || | || || |||||| ||||| ||||| || || | ||| Sbjct 65140 ACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCTCTCTT 65199 Query 122736 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 ||| | ||| | || | | || || || |||||||| ||||||||||| ||||| Sbjct 65200 CTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCAGCAAA 65259 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATT 122854 ||||| || | ||||| || || | | | | | | | |||| |||| ||||||| Sbjct 65260 CGCAACGAGTCTCTCGGC-AAACAGGGCTTCCTCGTCGTTGATCCATCTCATGGCCCATT 65318 Query 122855 TCGCCTTCTTCTCAATACATGG 122876 ||||||| || |||||||| Sbjct 65319 CGGCCTTCTCCTTGATACATGG 65340 >seq47 Length=849562 Score = 95.1 bits (104), Expect = 2e-14 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 164603 GTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGC 164662 ||| || || ||||| || || || || || || || || ||||| ||| | ||||| Sbjct 146555 GTACGGACGCGTTGCTCCTCGTTCTGGACTTGCAGTCAAACATGGGATTTCAACAGGTGC 146614 Query 164663 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 164722 || || |||||| | |||||| || ||||| ||||||||||| ||||| ||| Sbjct 146615 CGGAGTCATTGATGCTGACTATCGTGGAGAAGTGAAAGTCGTTCTTTTCAACCACTCCAG 146674 Query 164723 CAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 164774 ||||||||||| | || |||| || ||||| ||||| ||| | || ||| Sbjct 146675 TAAAGACTTTGAAATCAACGAAGGTGACCGCATTGCACAGCTTATACTCGAG 146726 >seq59 Length=152994 Score = 91.5 bits (100), Expect = 2e-13 Identities = 276/417 (66%), Gaps = 11/417 (3%) Strand=Plus/Minus Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503 ||||| | ||||| || ||||| | || | || | || | | ||| | || || Sbjct 34791 ATCTTCCTGTCAAACCGGCCCGGTCTGAGCAATGCCTGGTCCAAAACATCGGCACGGTTC 34732 Query 11504 GTGGCCGCAATAACCACAATGCCAGTCTCAT-TGTCAAAGCCATCCATCTCGGTGAGTAA 11562 ||| |||||| ||||| | | |||| || || || || ||||||||| ||| | Sbjct 34731 GTGCCCGCAAGCACCACCACGT-AGTCAGATGTGGTGAAACCGTCCATCTCGACGAGCAG 34673 Query 11563 TTGATTAATTGTTTGTTCTCTCTCATCATT--TGCTGGCA-TACCACCAGC--ACTGCGT 11617 ||| || | || | ||||||||| || || ||| |||| ||| || || ||| Sbjct 34672 TTGGTTCAAGGTGTTTTCTCTCTCGTCGTTGCTGCCGGCAGTACGGCCTTTTGACCGCGA 34613 Query 11618 TGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 11677 |||||| | |||||| ||||| || | |||| ||| | || |||||||| || Sbjct 34612 --CTTGCCGATCGCATCGATCTCGTCCACAAAGATAATCGACGGCGCGTTTTCGCGCGCC 34555 Query 11678 ATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTT 11737 | | ||||| ||||| |||| || || || |||||||||||||||||||| | Sbjct 34554 GTCTTGAAGAGCTCGCGCACCCGCGACGCCCCGACTCCAACAAACATCTCCACAAACTCA 34495 Query 11738 GCGGCAG-AGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAG 11796 | ||| | | ||| | ||| || || | ||||| || | || || || | Sbjct 34494 GACCCAGAAACGCTGTA-GAACGGCACGCCCGCCTCACCGGCCGTCGCCTTCGCCAGCAT 34436 Query 11797 GGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 ||||||||||| || || || | |||| ||| || || ||||||||||| || Sbjct 34435 CGTCTTTCCCGTTCCCGGAGGGCCTGTCAGAATGGCTCCCCGCGGGATCTTGGCGCC 34379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031481873600