Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq65 345 5e-90 seq45 120 4e-22 >seq65 Length=94251 Score = 345 bits (382), Expect = 5e-90 Identities = 1187/1825 (65%), Gaps = 47/1825 (3%) Strand=Plus/Minus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 |||| | || |||||||||||| || |||||||| || | ||||||| |||| | ||| Sbjct 85264 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 85205 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947 || || | ||||||| | |||||| | | | | || ||||| || || || Sbjct 85204 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGG 85145 Query 117948 TCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 118006 |||||| | ||| | | | || |||||||| || || | ||| | || ||||| Sbjct 85144 TCGATGTACGCGCCTCTG-TCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCA 85086 Query 118007 CACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCC 118066 || || | ||| |||| ||| | || | ||| | || | || ||||| || || Sbjct 85085 GACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAGCC 85026 Query 118067 ACCCGCCTTGACCATGAGATCCTTCAT--ATCCTTTGACCAGAGACCAATCTTTTTGAGA 118124 |||||| |||| || |||||| | | || ||| | |||| || || Sbjct 85025 GTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTT--CCACAATCCAAGGTTAACAAGG 84968 Query 118125 TCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 118184 ||| || | | | ||||| | |||||||| || || | ||| ||| Sbjct 84967 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 84908 Query 118185 ATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCT 118244 || |||| ||||| ||||| || ||||| || | ||||| || || | ||| || || Sbjct 84907 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 84848 Query 118245 GTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTG 118304 || ||||| || |||| | || || | ||| || | | | || || ||||| Sbjct 84847 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 84788 Query 118305 AGAGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTGCCACATA--TCAAACTGGAGG 118361 || | ||||||||| | || | ||| || | |||| || | || ||||| | Sbjct 84787 AGCGAGTCCCAGTCCCACA-GATCGGTTGGCTTCT--TGCCCCAAAGGTCGAACTGCAAA 84731 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT--CCGCCA 118419 ||||| || ||||| |||||||||||||| ||||| ||| ||| || ||| | |||| Sbjct 84730 ATACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATC--CCTAACGGCCA 84673 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 |||| ||||| | || |||| || || || || ||||| | |||| Sbjct 84672 GCTCGGCAGAGGCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCT 84613 Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539 | ||||||| || ||||| | |||| | || || || || || || || | Sbjct 84612 CTCTGGCCTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCT 84553 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGGA 118598 ||||||| | | |||| || | | | ||| || || | | || ||| | | ||| Sbjct 84552 GGACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGA 84494 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 ||| | || || ||||| | | | || || || || ||||||||||| ||||| | || Sbjct 84493 TAATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGC 84434 Query 118659 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGG----AAGGGCG 118712 ||||||||| | | | | || || | || | | | || ||| ||||||| Sbjct 84433 AGCTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCG 84374 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || ||||||| ||||||||| | ||| || | | |||||| | |||||| | Sbjct 84373 ATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAG 84314 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 ||||| || || ||| ||| | || | |||||| || || | ||| | ||| || || Sbjct 84313 CACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCG 84254 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 |||||||| |||||| ||||||| || || ||||| |||| || | ||| || | ||| Sbjct 84253 TCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCAC 84194 Query 118893 A-CATCGGCAGCTGGCACAGT--GGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949 | | || | || | || || ||||| | || || || | ||||| | |||||| Sbjct 84193 AGCTTCTGTGCCTTG-ACCGTCTGGCGTC--CACGGCCTTCCTTTTCGTATCTGGTGTAG 84137 Query 118950 AGGGCTTCAAACTCTTCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 119006 || | | ||||| || || |||| || || |||||||| |||| || || Sbjct 84136 AGCTCCTTGAACTCGTCGCCGTACACG---TCGGAAAGCCCTGGAGCCTCGGAAGGCGAG 84080 Query 119007 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 || || | ||| | | | || ||| || | || |||||| |||||||| ||||| ||| Sbjct 84079 AACAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGC 84020 Query 119067 GCCGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125 || | ||| || || | | | || || || | | || || || || | || | Sbjct 84019 GCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCA-TGGTTCTTCCGGATGTCGAT 83961 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC------CGCGATTGACCCCTT 119179 |||||| | ||||||| |||||| || || | ||||| |||| | || ||| Sbjct 83960 AAAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTT 83901 Query 119180 ACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239 | | || |||||| || || || || ||| ||| || || | | ||||||||| Sbjct 83900 --GTTG-CCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAAT 83844 Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTG 119299 ||| || | ||| ||| || || || || |||| ||| ||| | | ||| Sbjct 83843 GATGCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTG 83784 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 ||||||| |||||| || || || ||| ||||| | || || | |||| || | Sbjct 83783 AATGTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTC 83724 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 ||||| || ||||| ||||| |||| | || | | ||| ||| ||||| || || Sbjct 83723 ATAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG 83664 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 119479 || ||||| || || || |||||||| | ||||||| |||| | ||| ||||| Sbjct 83663 ATGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACAT 83604 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 | || ||| ||||| | |||| ||||||||| || || || ||||| || | || || Sbjct 83603 CAGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACG 83544 Query 119540 CATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTT 119599 ||| | ||||| |||||| | || | | ||||| | | || ||| || | Sbjct 83543 CATGACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG 83484 Query 119600 CTCCAAGGTCTTGAGACCAAAATAG 119624 ||||| ||||||| ||||||||| Sbjct 83483 CTCCAGCGTCTTGAAGCCAAAATAG 83459 >seq45 Length=88998 Score = 120 bits (132), Expect = 4e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || || ||||||||||| | | |||| | || ||||||||| |||||| Sbjct 65122 GGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACC 65181 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| || || | |||||| | |||||| |||| ||| |||||||||||||| || Sbjct 65182 AGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAAT 65241 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAA 130193 |||||||| || ||||||| ||| | ||| ||||| || | | | || | | Sbjct 65242 ACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAA-CAGGGCTTCCTCGTCGTTGA 65300 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCT 130241 ||| |||| ||||| | ||||| | || |||||| |||| ||||| Sbjct 65301 TCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCT 65348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434689790960