Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq65 246 4e-60 seq45 96.9 4e-15 seq47 93.3 5e-14 >seq65 Length=94251 Score = 246 bits (272), Expect = 4e-60 Identities = 1124/1758 (64%), Gaps = 47/1758 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| |||||||| ||||| ||||| || |||||| ||| Sbjct 83526 CCCCAGCACATGGTCATGCGTGTGGCCATTGGTATCCATGGCGATGACATTCCCAGCGTC 83585 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || |||||| ||| | |||| ||||| | ||||| || || Sbjct 83586 ATCGAGACGTACAACCTGATGTCGCAAAAATTCTTCACCCACGCGTCGCCAACTCTGTTT 83645 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 ||||| ||||| || || || ||||| || ||| | | |||| ||||| ||| Sbjct 83646 AATGCCGGTACTCCTCATCCGCAGATGTCTTCCTGTTTCTTGGTTGCCATGAAGGACGAC 83705 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || ||| |||| ||||||| || || | | ||||| | ||||| ||| ||||| Sbjct 83706 TCCATCGACGGCATCTATGACACCCTCAAGACCTGTGCTCTGATCTCCAAGGCTGCTGGA 83765 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 || ||||| ||||||| || | | ||| ||| ||| || || || || Sbjct 83766 GGCATTGGTCTGCACATTCACAACATTAGATCCACCGGGTCTTACATCGCTGGAACCAAC 83825 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 || || | || || ||||||||| | | || || ||| ||| || | || || Sbjct 83826 GGCACGTCCAACGGCATCATTCCAATGGTGAGAGTGTTCAACAACACCGCCAGATACGTC 83885 Query 104582 AATCAAGCTGGGCGTCGA-AAGGGATCTATCGCAGTCTATCT------TGAGCCATGGCA 104634 | || ||| | | | ||| | || ||| | ||| |||||||||||| Sbjct 83886 GACCA----GGGAGGCAACAAGCGGCCTGGCGCGTTTGCTCTGTACGTTGAGCCATGGCA 83941 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 | ||||||| | || || | || | || ||||| ||| | ||||| | | | | Sbjct 83942 CTCGGATATTTTTGACTTTATCGACATCCGGAAGAACCATGGTAAGGAGGA-GATCAGAG 84000 Query 104695 CC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 || | || || ||| | || || ||||||||||| || |||||| ||||||| ||| ||| Sbjct 84001 CCAGAGACCTGTTCCCTGCGCTGTGGATTCCAGACCTGTTCATGGAGAGAGTCGAGCAGA 84060 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG---G 104810 | | ||| | || || | || | |||| || || || ||||| |||| | Sbjct 84061 ACGCTGAGTGGACGCTGTTCTCGCCTTCCGAGGCTCCAGGGCTTTCCGA---CGTGTACG 84117 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC-GACG 104869 | || ||||| | | || ||||| | ||||| | ||||| || | ||| | |||| Sbjct 84118 GCGACGAGTTCAAGGAGCTCTACACCAGATACGAAAAGGAAGGCCGTG-GACGCCAGACG 84176 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 || | || | || | ||||| | || ||| | || | || || || || || || || Sbjct 84177 GT-CAAGGCACAGAAGCTGTGGTACGCCATTTTGGAGGCCCAGACGGAAACAGGCACGCC 84235 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 || |||||| ||||| |||||||| ||| |||| || || ||||| | ||| | || Sbjct 84236 ATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAGAACCTTGGTATCAT 84295 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 |||| || ||| | || ||||| | || | || ||| ||| ||| || Sbjct 84296 CAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCAGAGGAGGTGGCCGT 84355 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTG 105107 |||||| | || || ||||| || || | || || ||| ||||| || || Sbjct 84356 GTGTAATTTGGCGTCGATCGCCCTTCCAGCCTTCGTTGAGTCCGACGACAATACCAGCTG 84415 Query 105108 -----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162 | | ||||| || ||| | | || || |||||| || ||||| |||| | Sbjct 84416 GTACAACTTCGAAAAGCTGCACCAGATCACCAAGGTTGTCACTAAGAACCTCAACAAGAT 84475 Query 105163 TATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 || || ||||| | ||| || ||| ||| || | | ||| || ||| | || | | Sbjct 84476 CATCGACAGAAACTATTATCCTGTTCCAGA-GGCAAGAACATCCAACATGCGCAACAGGC 84534 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 105281 | |||| | ||||| ||||| || || || || ||||| | | | | |||| Sbjct 84535 CGATTGCCGTGGGTGTCCAGGGCCTGGCCGACGTGTTCATGCAGCTGAGACTGCCTTTTG 84594 Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341 | || || || | || | || | || || |||||||| || |||| ||| Sbjct 84595 ACTCACCAGAGGCCAGAGAGCTGAACATCCAGATTTTCGAGACCATCTACCACGGGGCTT 84654 Query 105342 TTGAGGCGAGTTCAGAGTTGGCAG--AGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 | ||||| | | ||| |||| | ||| ||||| ||| || ||||||||||| || Sbjct 84655 TGGAGGCCTCTGCCGAGCTGGCCGTTAGG--GATGGCAAATACGAGACCTTTGAGGGATC 84712 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGA--TATGTGGGAAGGTGAGACCAAGC-TTCA 105456 || || || || || | | || || || | || || || || |||| | || Sbjct 84713 GCCGGCGTCGCAGGGTATTTTGCAGTTCGACCTTTGGGGCAA---GAAGCCAACCGATCT 84769 Query 105457 CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516 | |||||||| | ||||||| || ||| || || | || || | || ||| | Sbjct 84770 GTGGGACTGGGACTCGCTCAAGGCCCGTATCCAGAAGGATGGACTCAGAAATTCGCTCTT 84829 Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576 ||||||| |||||||| || || || | || || ||||| |||| || || || || Sbjct 84830 GGTGGCTCCTATGCCAACCGCGTCGACATCGCAGATTTTGGGATATAACGAGTGTTTCGA 84889 Query 105577 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636 || ||||| | |||||||| |||||| || || || ||||| ||| ||||| Sbjct 84890 GCCTTACACCTCCAACATCTACTCCAGAAGAGTTCTTGCTGGTGAGTTCCAGATCGTCAA 84949 Query 105637 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 105696 | | | | || ||||| | |||| | ||| | | |||||| || | Sbjct 84950 CCCGTACTTGCTGAGGGACCTTGTTAACCTTGGATTGTGGAACGACTCGATGAAGAATTT 85009 Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756 ||| | || | || || || || || | || | ||| | || | ||| | Sbjct 85010 CATCATCAAGGACAACGGCTCGATCCAGAACTTGCCAAATGTGCCACAGGAGTTGAAGGA 85069 Query 105757 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 105816 |||||||||| || ||||| || | ||| | || |||||||| || || | Sbjct 85070 CCTGTACCGCACCGTCTGGGAGATTCCGCAGAAAAGCATTATCGACATGGCGGCCGACAG 85129 Query 105817 TGGTCGC-TTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGAT 105873 || ||| | ||| || | |||| ||| |||||| || | | | | ||||| || Sbjct 85130 AGG-CGCGTACATCGACC--AGTCGCAGTCGATGAATATCCACCTCAAGAACCCAACCAT 85186 Query 105874 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 105933 | |||| | | || |||||| | || | |||||||| || ||||| || || ||||| Sbjct 85187 GGGCAAGTTGACGTCGATGCACTTCTATGGCTGGAAGAAAGGACTCAAGACCGGCATGTA 85246 Query 105934 TTACCTCCGATCTAAGGC 105951 |||||| || | |||| Sbjct 85247 CTACCTCAGAACCCAGGC 85264 >seq45 Length=88998 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 ||||| ||| ||||| | || ||||| || |||||||| ||||||||||| || || Sbjct 65280 TTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTT 65221 Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917 | | || | |||||||||||| |||| || ||||| ||||| |||||| |||||| Sbjct 65220 GCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTTCTCGAACGAG 65161 Query 94918 CTTATCTCTCGTGACGAGGGACTCCA 94943 | |||| | |||||||| || || Sbjct 65160 TTGATCTGCAGAGACGAGGGTCTGCA 65135 >seq47 Length=849562 Score = 93.3 bits (102), Expect = 5e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 154099 AGGTGTGTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGT 154158 |||| ||| || || ||||| || || ||||| || || || |||||||| || | Sbjct 146549 AGGTACGTACGGACGCGTTGCTCCTCGTTCTGGACTTGCAGTCAAACATGGGATTTCAAC 146608 Query 154159 TGGTGCGGGTGTTGTTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCA 154218 ||||| || || ||||| | ||||| || ||||| ||||||||||||||||| || Sbjct 146609 AGGTGCCGGAGTCATTGATGCTGACTATCGTGGAGAAGTGAAAGTCGTTCTTTTCAACCA 146668 Query 154219 CGGAGACAAAGACTTTGAGGTAAAGAGGGGTGAGCGCATCGCACAACTTGTTCTTGAGA 154277 | ||||||||||| | || ||||| ||||| ||||| ||| | || |||| Sbjct 146669 CTCCAGTAAAGACTTTGAAATCAACGAAGGTGACCGCATTGCACAGCTTATACTCGAGA 146727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260318809840