Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq65 392 4e-104 seq23 154 2e-32 seq61 141 1e-28 seq64 118 1e-21 seq45 98.7 1e-15 >seq65 Length=94251 Score = 392 bits (434), Expect = 4e-104 Identities = 1154/1753 (66%), Gaps = 59/1753 (3%) Strand=Plus/Minus Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103 || ||||||||||| |||||||| || ||||||||||| || | |||||| || | | | Sbjct 85252 AGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAAC 85193 Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163 || | | || ||||||| | | ||| |||| ||||| ||||| |||| | || Sbjct 85192 TTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGGTCGATGTACGCG 85133 Query 80164 CCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATAC 80223 || | || |||||||| || ||||| || || ||||| ||||| || || || ||| Sbjct 85132 CCTCTGTCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTAC 85073 Query 80224 A---CCTTACGAAGCTCCTCTGGAA----TGTCCAGATTTTGCACACTGCCACCGTCCTT 80276 | |||| | ||||| ||| | || | || || || | ||| |||||| Sbjct 85072 AGGTCCTTC---AACTCCTGTGGCACATTTGGCAAG-TTCTGGATCGAGCCGTTGTCCTT 85017 Query 80277 TACAATTTGATTTTTCAATTCAGACGT-CCAGACACCAAGCTTGTGCAGATCTTTCACAA 80335 | || ||| |||| | || ||| ||| | ||||| || || || ||| | Sbjct 85016 GATGATGAAATTCTTCA-TCGAGTCGTTCCACAATCCAAGGTTAACAAGGTCCCTCAGCA 84958 Query 80336 GGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGAC-GCAGATACAGGTTTGTA 80394 || | ||| | || ||||| || || || | | | || || | ||| | Sbjct 84957 AGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAG-TAGATGTTGGAG 84899 Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454 ||||||||||| || |||||| | ||| | ||||| | || ||| || ||||| Sbjct 84898 GTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATA 84839 Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCT 80511 || | ||||| || ||||| | || || | ||||| |||| ||| | || | || Sbjct 84838 GGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCC 84779 Query 80512 GA---CCAAAAATCAACCCCAACGCTG-TGACCCCACATGTCGTGCTGCAAGATGCCCTC 80567 | ||| | ||| ||| | ||||| | |||| |||||| || |||| Sbjct 84778 CAGTCCCACAGATCGGTTG----GCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTG 84723 Query 80568 CGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTC---ACA 80624 ||||||||| || ||| | || |||||||| ||| ||| | ||||||||| | | Sbjct 84722 CGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGA 84663 Query 80625 CGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGC 80684 | ||||| | ||| |||| || ||| ||| || | |||||| | | || Sbjct 84662 GGCCTCCAAA---GCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGC 84606 Query 80685 CTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCC 80744 || ||| ||| || | || | || | |||||||||||| ||||||||||| || || Sbjct 84605 CTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACC 84546 Query 80745 GATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGT 80803 | ||| ||||| | || |||| |||| ||| | || ||||| |||| || ||| ||| Sbjct 84545 CACGGCAATCGGCCTGTTGCGCATGTTGGAT-GTTCTTGCCTCTGGAACAGGATAATAGT 84487 Query 80804 TATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCT 80863 | | ||||||| ||| ||||| || |||||| || | | || || || | Sbjct 84486 TTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTT 84427 Query 80864 GAAAGTCGAAT----TGGT-------TCCCCTTCA-CAAATGCCGGAAGGCTCAGGGACG 80911 |||| | | |||| || ||| | || || |||||| | |||| Sbjct 84426 CGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCGATCGACG 84367 Query 80912 CCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAAT 80971 ||| ||| |||||||||||||| || | | || ||||||| ||||| |||||||| Sbjct 84366 CCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCACAAAT 84307 Query 80972 TAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT 81031 |||| ||||| || |||| ||||| |||||||| | ||||| |||||| |||||||||| Sbjct 84306 TAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTGT 84247 Query 81032 AGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGC 81091 | |||| | || || || || || ||| | || | ||||||| ||| | || Sbjct 84246 ACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTCT 84187 Query 81092 GCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCG 81150 | ||||||||| || ||| |||||| | || ||| ||| ||| || | | Sbjct 84186 GTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGC-TCCTTG 84128 Query 81151 AACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAG 81210 |||| | | |||| | || | || |||| |||| ||| | | ||| ||| Sbjct 84127 AACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCAC 84068 Query 81211 TCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGG 81270 || | || | ||| || || |||||| ||| || ||||| || || | ||||||| Sbjct 84067 TCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGG 84008 Query 81271 TCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATG 81330 || | | | |||||| | ||| ||||| || | |||| |||||| | || Sbjct 84007 TCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATA 83948 Query 81331 TCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGAC----GGCCACCCTG 81386 |||| ||||||||||| | |||| || | || | || || | ||| ||||| Sbjct 83947 TCCGAGTGCCATGGCTCAACGTACAGAGCAAACG-CGCCAGGCCGCTTGTTGCCTCCCTG 83889 Query 81387 GTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTG 81446 || |||||| | ||| || ||| || || | || ||| || ||||| || | ||| Sbjct 83888 GTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGT 83829 Query 81447 ACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTG-AAAGACCGA 81505 ||||| || || |||| ||||| ||| | | ||| ||| || ||||| | Sbjct 83828 GCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTG-TGAATGTGCAGACCAA 83770 Query 81506 TGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGA 81565 |||| || | ||| || ||| ||||||| || | ||| ||||| || || |||| Sbjct 83769 TGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGA 83710 Query 81566 TGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CC 81623 || || | |||||| ||| |||||||||| |||||||| || | ||| || Sbjct 83709 TGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG--ATGAGGAGTACC 83652 Query 81624 GGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGT 81683 |||||| ||||| ||||| | |||||| |||| | | |||||||||| || || Sbjct 83651 GGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGT 83592 Query 81684 TTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTA 81743 || |||||| ||||| || || || || ||||| || || |||||||| | ||||| Sbjct 83591 CTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTG 83532 Query 81744 CTGGGGCGTCTCG 81756 |||||| ||||| Sbjct 83531 CTGGGGTCTCTCG 83519 >seq23 Length=343512 Score = 154 bits (170), Expect = 2e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 ||| |||||||||||| |||||||| || ||||| |||||||| || || ||||| |||| Sbjct 313019 CTACAATGCAAATCTTCGTCAAGACCCTGACCGGTAAGACTATCACCCTCGAGGTGGAGT 313078 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | || | ||| | || | ||| | || || ||||||||||||||||| || || | Sbjct 313079 CTTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCTG 313138 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||||||| | || ||||| ||||||||||| |||||||| | | || || | |||| Sbjct 313139 ACCAGCAAAGACTGATTTTCGCTGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACT 313198 Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 | || |||| ||||| |||||| | || || ||| Sbjct 313199 ACAACATCCAGAAGGAGTCCACTTTGCACCTGGTC 313233 >seq61 Length=567400 Score = 141 bits (156), Expect = 1e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | ||||| ||||| || || |||||||||||||| | Sbjct 444921 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 444862 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | |||||||| || ||||| ||||| || || |||||| Sbjct 444861 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 444802 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||| ||||||||||||||||| || | | | || || | |||||||| Sbjct 444801 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 444742 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| || || | ||||| || ||| Sbjct 444741 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTG 444709 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | || || ||||| || || |||||||||||||| | Sbjct 444693 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 444634 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | ||||||||||| ||||| ||||| || || |||||| Sbjct 444633 GACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAG 444574 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||||||||||||||| || || || | | | || || | || || || Sbjct 444573 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 444514 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| ||||||||| | || ||| | || | ||||| Sbjct 444513 ATTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGGTGG 444467 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | ||||| ||||| || || |||||||||||||| | Sbjct 445377 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445318 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | |||||||| || ||||| ||||| ||||| |||||| Sbjct 445317 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445258 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||||||||||||||| || || || | | | || || | || || || Sbjct 445257 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445198 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| || || | || || || ||| Sbjct 445197 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTG 445165 Score = 113 bits (124), Expect = 5e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | ||||| ||||| || || |||||||||||||| | Sbjct 445149 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445090 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| |||| ||||||||||||| || ||||| || || || || || Sbjct 445089 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445030 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560 ||| | | ||||| ||||||||||||||||| || Sbjct 445029 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGA 444995 Score = 102 bits (112), Expect = 9e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| | |||||||| ||||| ||| | ||||| || || Sbjct 445606 AATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTC 445547 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | ||| | || | || ||||| || ||||| ||||| ||||| ||||| Sbjct 445546 TGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCA 445487 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560 ||| | || ||||||||||||||||| || || || Sbjct 445486 GCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGA 445451 >seq64 Length=816055 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| | ||||| ||||| || || | ||||| ||||| Sbjct 728497 AATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCTTC 728556 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || | ||| | || || || ||||| || ||||| ||||| ||||| Sbjct 728557 CGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGACCA 728616 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | || || || ||||||||||||||||| | | ||||| ||||||| || Sbjct 728617 GCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTACAA 728676 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| || |||||| | ||| | || || | || | ||||| Sbjct 728677 CATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGG 728724 >seq45 Length=88998 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/192 (72%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGAA--TCGTGG--GTCGTCGTTTGGTCAGCGTCT 64721 ||||| ||||||||||| | ||||| || || || | | | ||||| || | || Sbjct 65325 AAGGCCGAATGGGCCATGAGATGGATCAACGACGAGGAAGCCCT-GTTTGCCGAGAGACT 65267 Query 64722 CGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTG 64781 || || ||||| ||||| || |||||||| ||||| || || || || ||||| Sbjct 65266 CGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTGCCTCGATCTTCTG 65207 Query 64782 GCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGA 64841 ||| || ||| | || |||||||| |||||| | || ||||||||| |||||| | || Sbjct 65206 GCTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTTCTCGAACGAGTTGATCTGCAGAGA 65147 Query 64842 CGAGGGGCTCCA 64853 |||||| || || Sbjct 65146 CGAGGGTCTGCA 65135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309929493920