Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq23 170 4e-37
seq64 165 2e-35
seq61 152 1e-31
seq32 113 1e-19
>seq23
Length=343512
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| ||||| ||||| | ||||||||| || |||||||| || || | ||| || ||
Sbjct 313241 AGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTG 313182
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| || || |||||||| || ||||| || || | ||| |||||||| || | ||| |||
Sbjct 313181 CCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCC 313122
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|||||||||||||| || ||||| ||||||||||| || || |||||||| |||
Sbjct 313121 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 313062
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118
|| ||||| || || || ||||| || || | |||||| ||
Sbjct 313061 ATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCATTGTA 313020
>seq64
Length=816055
Score = 165 bits (182), Expect = 2e-35
Identities = 169/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| || || | || | ||||||||||||||||||||| || || | |||||| ||
Sbjct 728715 AGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTG 728656
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| || || || ||||| || |||||||| | | ||| ||||||||||| | ||||||
Sbjct 728655 CCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCT 728596
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| |||||||| || ||||| ||||||||||| || || ||||| | |||
Sbjct 728595 TTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGTG 728536
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| |||||||| || | ||||| || || | |||||||||
Sbjct 728535 ATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTT 728495
>seq61
Length=567400
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| ||||| | ||| | || |||||||| || ||||| ||||| | || || || ||
Sbjct 445390 TCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACC 445449
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| |||||||| || || || || || | ||| ||||||||||| | |||||||||
Sbjct 445450 GTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTT 445509
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| || ||||| ||| || || ||||| |||||||| ||| ||||| | ||||||
Sbjct 445510 ATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGAT 445569
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || | |||||| || || | |||||||||
Sbjct 445570 AGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTTT 445608
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| ||||| | || ||||| ||||| ||||| ||||| | || || || || |||||
Sbjct 445169 ACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCT 445228
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
|||||||| || || || || || | ||| ||||||||||| | ||||||||| || ||
Sbjct 445229 AGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGA 445288
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
|| || || || || ||||| ||||||||| |||||||| || ||||| ||||||
Sbjct 445289 ATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTT 445348
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | || || || || | |||||
Sbjct 445349 CCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
>seq32
Length=90591
Score = 113 bits (124), Expect = 1e-19
Identities = 392/600 (65%), Gaps = 15/600 (3%)
Strand=Plus/Plus
Query 139431 AATGTTGACCAACGAACATGGTACAGCCTCAAACATTAAGTCGCGAGTCAACAGGCTTTC 139490
|||||||||| | ||| ||||||||||||| || ||||| ||||| |||||||| |||||
Sbjct 58797 AATGTTGACCGATGAATATGGTACAGCCTCCAATATTAAATCGCGTGTCAACAGACTTTC 58856
Query 139491 TGTTCTTGGGGCGATCGTCTCTTGCCAGCAAAAGTTAAAACTTTTACGGGAC-GTCCCAA 139549
||| ||| || ||| || ||||||||| || |||| ||||| | | || || |
Sbjct 58857 TGTGCTTTCTGCCATCACGTCGACCCAGCAAAAATTGAAAC-TTTACAGCTCTGTTCCTA 58915
Query 139550 AGAACGGACTTGTAATTTTTAGCGGAAGTGTTATGCTTCCCG---AAGGCAAGGAGAAAA 139606
| |||||||| || || | | || |||| | ||| |||| || ||||| |
Sbjct 58916 AAAACGGACTGGTTATCTACTGTGGTGAAGTTA---TCACCGAACAAGGTAAAGAGAAGA 58972
Query 139607 AGGTTG--CATTCGACATTGAACCTTTCCGTCCAATCAGCCAGAAAGTTTACGCATGCGA 139664
| ||| |||| | | || |||||| || || | | | ||| |||||
Sbjct 58973 A-ATTGACCATT-GGTTTCGAGCCTTTCAAGCCCATTAATACGTCTTTGTACCTGTGCGA 59030
Query 139665 CAGTGTTTTCCATACGGATTGTCTGAAAGATCTGTTGTATGATGACCAATCTTATGGTTT 139724
|| |||||||| || || || ||||| | |||| | | || ||
Sbjct 59031 CAACAAGTTCCATACCGAGGCGCTTTCTGAGTTGTTGGAGAGTGACGATAGATTCGGGTT 59090
Query 139725 TATTATCGTGGATGGCTCCGGTGTTTTATTTGCGACTCTTTCAGGAAGTACAAGAACAAC 139784
||| || |||| || ||| | ||| |||| || || | || | || ||| |
Sbjct 59091 CATTGTCATGGACGGTAACGGAGCTTTGTTTGGTACGCTCTGTGGCAACACCAGAGAAGT 59150
Query 139785 AATCTCGAGTTTCCAAGTTTGCCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCT 139844
| | ||| ||| |||||||||||||||||||||||| || |||||||| |
Sbjct 59151 GTTGCACAAATTCACAGTCGACCTTCCAAAGAAGCACGGAAGAGGTGGTCAATCTGCATT 59210
Query 139845 GCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAA 139904
|||||| ||| | || | ||||| || ||||| || | ||||| || || |||
Sbjct 59211 GCGTTTCTCGAGATTGAGAGATGAAAAAAGACACAATTATGTTAGAAAGGTGGCCGAGGT 59270
Query 139905 CGCAATACAGTGTTTTATCAAAGACAACAAGTGTTTTGTTTCTGGTATTG-TTTTGGCAG 139963
|| | ||| ||| |||| | ||||| ||| | || |||| |||||||||
Sbjct 59271 GGCTGTTCAGAATTTCATCACCGGAGACAAGGTCAACGTTGCCGG-ATTGATTTTGGCAG 59329
Query 139964 GTTCCGCAGAGTTCAAGACAAAGCTCCTGGAATCTGACTTTTTTGACCCGAGGCT-CAAG 140022
|| || || |||||||| |||| ||||||| | || || | |||||| ||||
Sbjct 59330 GTAGTGCCGATTTCAAGACGGAGCTGAGTAGATCTGACATGTTCGATCAGAGGCTGCAAG 59389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151019792090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |