Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10] 66 sequences; 8,893,565 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq65 199 6e-46 seq52 168 1e-36 >seq65 Length=94251 Score = 199 bits (220), Expect = 6e-46 Identities = 364/527 (69%), Gaps = 6/527 (1%) Strand=Plus/Minus Query 76691 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTA 76750 || || | |||||| || |||||||| || | || | || | | || || || || Sbjct 83959 AAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTG 83900 Query 76751 TTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATG 76810 || |||||||| || | |||||||| ||||| || | ||||||| ||||||||| ||| Sbjct 83899 TTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATG 83840 Query 76811 CCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATA 76870 ||||| || || || || ||||||| || ||| || | | ||| || ||| Sbjct 83839 CCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATG 83780 Query 76871 GATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAG 76930 || || || ||||| || || ||||| ||||||||| || | ||||||||| Sbjct 83779 TGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAG 83720 Query 76931 ATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGA 76990 ||||| || || || ||| ||||| || | |||||| |||||| || ||||| Sbjct 83719 ATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGA 83660 Query 76991 ACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGA 77050 ||| || |||||||||| || || || || || ||||| |||||| || | || Sbjct 83659 GGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGG 83600 Query 77051 TTGTATGTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCA 77108 ||||| || || || || ||| | || ||| | ||| || || | || ||||||| Sbjct 83599 TTGTACGTCTCGATGAC-GCTGGGA-ATGTCATCGCCATGGATACCAATGGCCACACGCA 83542 Query 77109 TCAACATATGCTGAGGTCGTTCTACAGTCTTAT-TATTTATTTTCAACAAGTATGATTTT 77167 | | ||| ||||| |||| || | | ||| | || || ||||| | ||||| Sbjct 83541 TGACCATGTGCTGGGGTCTCTCGGC-GACTTTTCCATCAATCTTCAAGAGATATGACCGC 83483 Query 77168 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 77214 |||| || || || |||||||||||||| ||||||||||| ||||| Sbjct 83482 TCCAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTA 83436 >seq52 Length=883241 Score = 168 bits (186), Expect = 1e-36 Identities = 609/929 (66%), Gaps = 24/929 (3%) Strand=Plus/Minus Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTA---CCTCATTAGCATTGGCATATTGTAT 76326 ||| || | ||| ||||||| || || ||| ||||||||| || | ||||| | Sbjct 650508 AAGTGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAAC 650452 Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386 || || || ||||| ||||||| || || | |||||| ||||| |||||| Sbjct 650451 GATTTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTT 650392 Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 || || | ||| || || || | || || || || ||||| |||| || | | || Sbjct 650391 ATTGCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTAT 650332 Query 76447 AGATTTCCAGACGACTCTAG-CTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATAT- 76504 | | ||| | | ||| | |||| | | || | || || ||| | |||||| Sbjct 650331 CGCATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACC 650273 Query 76505 TGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCAT-- 76562 ||| | || | | ||||||||||||| || ||| | |||||| ||| || Sbjct 650272 TGT-TGTAAAGCTTGACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCC 650214 Query 76563 TCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTA 76622 ||||| | | | ||||||| ||||| || || | |||||| | ||| |||| Sbjct 650213 TCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTA 650156 Query 76623 TCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC-TGTATTCTTTTTA 76681 |||| |||||| ||||| ||||| | | | |||||| ||||| || || | | | Sbjct 650155 TCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCA 650096 Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA-CACC 76740 || || |||||||| | | || | |||||| || |||| ||| || || | || | || Sbjct 650095 AG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACAT-GCAAAAAGCGCC 650038 Query 76741 CGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACAT 76800 |||| |||||| || || ||||| | || | || ||| | ||| | ||| | ||| Sbjct 650037 TGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCAT 649978 Query 76801 TGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT 76860 || | || ||||| ||||||||||| ||||||||||| ||| || || || || Sbjct 649977 AGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGAT 649918 Query 76861 ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAA 76920 || || || ||| ||||| || ||| |||||| || || || | | | | || Sbjct 649917 GTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGAA 649859 Query 76921 T-GTGTCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGAAGAAAACAGCTAGAC 76978 | || | ||||| | |||| || |||| ||| ||||||||||||| || Sbjct 649858 TCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGAT 649800 Query 76979 ATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTT 77038 | | | | | || || || || |||| ||||| || ||||| |||| ||||| Sbjct 649799 AAATTAGGCGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTATTTT 649740 Query 77039 TCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACA 77098 || || | || |||||||||| | ||| ||||||| | || || || || | Sbjct 649739 TCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCAATG 649680 Query 77099 GCGACACGCATCAACATATGCTGAGGTCGTTC-TACAGTCTTATTATTTATTTTCAACAA 77157 || || | ||| |||| || |||||| || | ||||| || ||||| | ||| Sbjct 649679 GCCACTCTCATAAACAAATACTGAGGAGTCTCGCAAGGTCTT-CCATCCATTTTTAGCAA 649621 Query 77158 GTATGATTTTTCCAAAGTTTTAAAACCAA 77186 |||||| |||||| ||| | ||||||| Sbjct 649620 ATATGATCTTTCCATTGTTCTGAAACCAA 649592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933811829120