Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq64 187 5e-42
seq23 161 2e-34
seq61 143 6e-29
seq30 86.0 1e-11
>seq64
Length=816055
Score = 187 bits (206), Expect = 5e-42
Identities = 180/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | ||| | || |||| ||| || ||| |||||||||||||||||||| |
Sbjct 728725 ACCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGA 728666
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || | ||| ||||| ||||| || ||||| |||||||| | ||| |||||| ||
Sbjct 728665 AAGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGG 728606
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || || |||||||||||||| | || ||| ||||||| ||||| |||| |||||
Sbjct 728605 GATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGAC 728546
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| | ||||| ||||| || ||||| ||||| ||||| |||||||||||
Sbjct 728545 CTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTT 728495
>seq23
Length=343512
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | ||| | || ||||| || || ||| || || ||||||||||||||||
Sbjct 313251 ACCACCTCTCAGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGA 313192
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || | ||| ||||| || || || || || || |||| | ||| |||||| ||
Sbjct 313191 AAGAGTTCTGCCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGG 313132
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || ||
Sbjct 313131 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 313072
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
||||| ||||| |||||||| |||| ||||| ||||| || ||||||
Sbjct 313071 CTCGAGGGTGATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCATT 313023
>seq61
Length=567400
Score = 143 bits (158), Expect = 6e-29
Identities = 148/194 (76%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
||||| || |||||||| || | || || | || || ||||| || || || |||||
Sbjct 445415 TCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAA 445474
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | ||| |||||| || || || ||||| ||||| ||||| | ||| || ||
Sbjct 445475 ATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATCTTCGATTTGACATTA 445534
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||||||||| |||| ||| || || | |||||| || || || |||||||||||||||
Sbjct 445535 TCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACG 445594
Query 283089 AATATCTGCATTTT 283102
|| |||||||||||
Sbjct 445595 AAAATCTGCATTTT 445608
Score = 143 bits (158), Expect = 6e-29
Identities = 169/226 (75%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 316977 GGATCCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTC-GTCGGGAACC 317035
||| ||||| | ||| ||||||||||| ||||| | | | | | ||| || ||||| |
Sbjct 484389 GGAACCGTCAATGTCGTGCTCAACATAGACAGTTCT-ACATTCTTCTTGAGTTGGGAAAC 484331
Query 317036 CTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGC 317095
|||| | |||||||| |||| ||||||||||| || ||||| |||||||| || || |
Sbjct 484330 CTTCGACTTGACCGTTGGCAATAGCCCTCATCAGAGTAGACTTACCAGCACCGTTTGGAC 484271
Query 317096 CGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCT 317155
|||||||||| || | | | |||||| ||| | || ||||||| | ||||
Sbjct 484270 CGCAAAGACCGTATCTTCTAGCTCTCTTCAATCTAAGTTGAGTCTTGTTCAATAAGATCT 484211
Query 317156 TACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| ||||||| ||||||||||||||||| | ||| || ||||| ||
Sbjct 484210 TGGCACCATAAGCCAGAGAGAACTCACAGTTACAGAGATCCTCACC 484165
Score = 132 bits (146), Expect = 1e-25
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || ||||| || || || ||||| || |||||||| ||||
Sbjct 444922 ACCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGA 444981
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || | ||| || || ||||| || || || || ||||| | ||||| ||| |||
Sbjct 444982 CAGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGG 445041
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||| || || || || || | ||| || ||||||||||||| || | || ||
Sbjct 445042 GATACCCTCTTTATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAAC 445101
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || ||||| || |||||||| || |||||
Sbjct 445102 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445149
Score = 111 bits (122), Expect = 3e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930
||||||| | ||| | | |||| ||| | || ||| || || |||||||| || |
Sbjct 444465 AACCACCTCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGG 444524
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|| || | || || ||||| || || || ||||| || | | ||| |||||| |
Sbjct 444525 ACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGG 444584
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
| || || ||||| || || || || | || ||| ||||||||||||| || | || |
Sbjct 444585 GGATTCCTTCCTTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAA 444644
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || ||||| ||||| || ||||| || |||||||| || |||||
Sbjct 444645 CCTCAAGGGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 444693
Score = 111 bits (122), Expect = 3e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||||||| || || || ||||| ||||| ||||| | | ||| | || || ||
Sbjct 444713 ACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGATAACGTTCTACCGTCTTCG 444772
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
||||| || || || || || | | ||| |||||| || || || ||||| |||||
Sbjct 444773 AGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATCTTGA 444832
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
|| || | || || ||||||||||||| || | || || || || ||||| |||||
Sbjct 444833 ATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTT 444892
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || |||||||| || |||||
Sbjct 444893 CCGGTCAAGGTTTTAACGAAAATTTGCAT 444921
Score = 111 bits (122), Expect = 3e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
||||| || || || || ||||| |||||||| || | || || | || || |||
Sbjct 445169 ACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCT 445228
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
|| || || || ||||| || | | ||| |||||| || || || ||||| |||||
Sbjct 445229 AGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGA 445288
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
|| || | || || ||||||||||||| || | || || || || ||||| |||||
Sbjct 445289 ATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTT 445348
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || |||||||| || |||||
Sbjct 445349 CCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
>seq30
Length=286775
Score = 86.0 bits (94), Expect = 1e-11
Identities = 180/268 (67%), Gaps = 3/268 (1%)
Strand=Plus/Minus
Query 316573 ttCACGAATTCGGACAGATTTCCTTTATACTTCTTCAGCTTCAGGTTGGGTTCGTAATGG 316632
|| || || ||||||| || || || || | | ||| ||| ||| ||| || ||
Sbjct 188480 TTGACAAACTCGGACAAGTTGCCCTTGTAGTACACCAGTTTCTTGTT---TTCATAGTGT 188424
Query 316633 ATGATAGAAGTACAGACAGCATCGAGGAAACCAGAATCGTGTGATACAATCACACATGAA 316692
|||| ||| ||||||| || | || ||||||||||| || ||||||| | | |
Sbjct 188423 ATGACGTCAGTGCAGACAGTGTCCAAAAATCCAGAATCGTGCGAAACAATCAGAGACGTG 188364
Query 316693 ACGCCTTTTAGGTTGACCAGATAGTCGATCAGCCAGCTCACATTCGACACAGAAAGATGG 316752
| || | | | || || || || ||||| ||||||| || ||| ||||||
Sbjct 188363 ATATCTGTGTGCTGAACTAGGTAATCTTCAAGCCATTTCACATTGGAAACATCCAGATGG 188304
Query 316753 TTGGTCGGTTCGTCAAGTAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGAGCA 316812
||||| || ||||| || || || | | || | || ||||| || | || || ||
Sbjct 188303 TTGGTTGGCTCGTCGAGAAGCAGAACGTCAGCCTTCATAAGCATGGCTCTCGCAAGTTCA 188244
Query 316813 AGCTTCATTTTCCACCCCCCGGAAAGAG 316840
|||||||| ||||| || || || ||||
Sbjct 188243 AGCTTCATCTTCCATCCTCCTGAGAGAG 188216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738314851164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |