Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq23 120 2e-22
seq64 116 3e-21
seq61 114 9e-21
>seq23
Length=343512
Score = 120 bits (132), Expect = 2e-22
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169
|| ||||||||||| | |||||||| | ||| |||||| ||||||||||| || |
Sbjct 313250 CCACCTCTCAGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 313191
Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||||| || |||| || |||||||| || || || |||| | ||||| || | |
Sbjct 313190 AGAGTTCT-GC-CGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTG 313133
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| | || ||||| ||| ||||| ||| | | | |||||||||| || ||||
Sbjct 313132 GGATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCA 313073
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | || || ||||| || || |||||||| ||||||||||||||
Sbjct 313072 CCTCGAGGGTGATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCAT 313024
>seq64
Length=816055
Score = 116 bits (128), Expect = 3e-21
Identities = 166/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||||||||| |||| || | ||| ||| |||||||||||||| ||
Sbjct 728727 ATACCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCT 728668
Query 44168 GCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| || || || |||| || || ||||| ||||| |||||||| | ||||| || |
Sbjct 728667 GAAAG--GGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAG 728610
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
||| | ||||| || || ||||| ||| | | | |||||||||| || |
Sbjct 728609 GAGGGATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACT 728550
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||| || || |||||||| || | |||||| ||||| || |||||
Sbjct 728549 CGACCTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 728498
>seq61
Length=567400
Score = 114 bits (126), Expect = 9e-21
Identities = 168/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||||| |||||||| | || ||||||||| ||||||||
Sbjct 445144 TTGCATACCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTA 445203
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
||||| ||||| | |||| || |||||||| || ||||| || | | |||||
Sbjct 445204 ATCGGACAGAGTT--CTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGG 445261
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|| | ||| | |||||||| || || || ||| | | | || ||||| | |
Sbjct 445262 TCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAG 445321
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| | || || |||||||| || | ||| || ||||| ||||||||
Sbjct 445322 GACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445377
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168
|| |||||||||||||| |||| ||||| || ||||| || |||||||||||||
Sbjct 444467 CCACCTCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGAC 444526
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||||| | |||| || |||||||| || ||||| || | | ||||| || | |
Sbjct 444527 AGAGTT--CTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGG 444584
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| | |||||||| ||| || || ||| | | | || ||||| | ||| || |
Sbjct 444585 GGATTCCTTCCTTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAA 444644
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | || || |||||||| || | ||| || ||||| ||||||||
Sbjct 444645 CCTCAAGGGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 444693
Score = 96.9 bits (106), Expect = 2e-15
Identities = 164/236 (69%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||| |||||||| | || ||| || || ||||||||
Sbjct 444916 TTGCATACCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTA 444975
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
||| | ||||| | |||| || || ||||| || || || ||||| | ||| |||
Sbjct 444976 ATCAGACAGAGTT--CTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGA 445033
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|| | || | ||| || || ||| || || |||| | | || ||||| | |
Sbjct 445034 TCAGGCGGGATACCCTCTTTATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGAG 445093
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| | || || |||||||| || | ||| || ||||| ||||||||
Sbjct 445094 GACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445149
Score = 87.8 bits (96), Expect = 1e-12
Identities = 162/236 (69%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||| |||| ||| | || ||| || || ||||||||
Sbjct 445372 TTGCATACCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTA 445431
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
||||| ||||| | |||| || |||||||| || ||||| || | | |||||
Sbjct 445432 ATCGGACAGAGTT--CTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGG 445489
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|| | ||| | |||||||| || |||||| || | | | || ||||| |
Sbjct 445490 TCAGGAGGGATTCCTTCCTTATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAA 445549
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || || || || || | ||||| ||||| || |||||
Sbjct 445550 GATTCTACCTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCAT 445605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990110432722
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |